Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) parDE/ParE-RHH
Location 1343050..1343584 Replicon chromosome
Accession NZ_CP123784
Organism Minwuia sp. IMCC4030

Toxin (Protein)


Gene name parE Uniprot ID -
Locus tag QGV56_RS06205 Protein ID WP_281018586.1
Coordinates 1343050..1343349 (-) Length 100 a.a.

Antitoxin (Protein)


Gene name parD Uniprot ID -
Locus tag QGV56_RS06210 Protein ID WP_281018585.1
Coordinates 1343339..1343584 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QGV56_RS06180 1339363..1339596 - 234 WP_281018591.1 hypothetical protein -
QGV56_RS06185 1339689..1339955 - 267 WP_281018590.1 hypothetical protein -
QGV56_RS06190 1340117..1340965 + 849 WP_281018589.1 3-hydroxyacyl-CoA dehydrogenase family protein -
QGV56_RS06195 1341047..1341850 + 804 WP_281018588.1 SDR family oxidoreductase -
QGV56_RS06200 1341862..1343013 + 1152 WP_281018587.1 NADH:flavin oxidoreductase/NADH oxidase -
QGV56_RS06205 1343050..1343349 - 300 WP_281018586.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QGV56_RS06210 1343339..1343584 - 246 WP_281018585.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin
QGV56_RS06215 1343738..1345273 + 1536 WP_281018584.1 acetyl-CoA acetyltransferase -
QGV56_RS06220 1345270..1346508 + 1239 WP_281018583.1 MFS transporter -
QGV56_RS06225 1346546..1347250 + 705 WP_281018582.1 SDR family oxidoreductase -
QGV56_RS06230 1347290..1348204 - 915 WP_281018581.1 alpha/beta hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(8-94)

Antitoxin

Antitoxin ParD

(1-80)


Sequences

Toxin        


Download         Length: 100 a.a.        Molecular weight: 11487.98 Da        Isoelectric Point: 6.4822

>T279153 WP_281018586.1 NZ_CP123784:c1343349-1343050 [Minwuia sp. IMCC4030]
MPDSDPGYRLSPLARTDLEDIWRYTFENWSLEQADRYHGTIMTAILALADGSVSGSRADVREGYFKLRAGSHVLFYRKAD
TTLEIMRILHQRMDVDRHL

Download         Length: 300 bp

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 8888.82 Da        Isoelectric Point: 5.0981

>AT279153 WP_281018585.1 NZ_CP123784:c1343584-1343339 [Minwuia sp. IMCC4030]
MARNTSVSLGDHFTGFIDSQVRDGRYGSASDVVRAGLRLLEEHETRVRALQNALIAAEESGPPEAFDSDAFLEEMRKKHA
G

Download         Length: 246 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References