Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | omega-epsilon-zeta/zeta-epsilon |
| Location | 1347065..1347563 | Replicon | chromosome |
| Accession | NZ_CP123751 | ||
| Organism | Ligilactobacillus animalis strain ZSB1 | ||
Toxin (Protein)
| Gene name | zeta | Uniprot ID | - |
| Locus tag | QFF56_RS06830 | Protein ID | WP_283534509.1 |
| Coordinates | 1347065..1347289 (-) | Length | 75 a.a. |
Antitoxin (Protein)
| Gene name | epsilon | Uniprot ID | Q9AL01 |
| Locus tag | QFF56_RS06835 | Protein ID | WP_002331065.1 |
| Coordinates | 1347291..1347563 (-) | Length | 91 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QFF56_RS06810 (QFF56_06810) | 1343894..1344196 | - | 303 | WP_005917836.1 | hypothetical protein | - |
| QFF56_RS06815 (QFF56_06815) | 1344382..1345026 | - | 645 | WP_283534508.1 | Crp/Fnr family transcriptional regulator | - |
| QFF56_RS06820 (QFF56_06820) | 1345054..1345977 | + | 924 | WP_016496411.1 | IS30 family transposase | - |
| QFF56_RS06825 (QFF56_06825) | 1346347..1347027 | - | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
| QFF56_RS06830 (QFF56_06830) | 1347065..1347289 | - | 225 | WP_283534509.1 | zeta toxin family protein | Toxin |
| QFF56_RS06835 (QFF56_06835) | 1347291..1347563 | - | 273 | WP_002331065.1 | antitoxin | Antitoxin |
| QFF56_RS06840 (QFF56_06840) | 1347580..1347789 | - | 210 | WP_000527318.1 | peptide-binding protein | - |
| QFF56_RS06845 (QFF56_06845) | 1347888..1348784 | - | 897 | WP_002334978.1 | AAA family ATPase | - |
| QFF56_RS06850 (QFF56_06850) | 1349103..1349675 | - | 573 | WP_001079938.1 | HTH domain-containing protein | - |
| QFF56_RS06855 (QFF56_06855) | 1349951..1350745 | - | 795 | WP_001096887.1 | aminoglycoside O-phosphotransferase APH(3')-IIIa | - |
| QFF56_RS06860 (QFF56_06860) | 1350838..1351368 | - | 531 | WP_000627289.1 | streptothricin N-acetyltransferase Sat4 | - |
| QFF56_RS06865 (QFF56_06865) | 1351365..1352273 | - | 909 | WP_001255866.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Integrative and Conjugative Element | aph(3')-III / ant(6)-Ia / erm(T) | - | 1340633..1401988 | 61355 | |
| - | inside | IS/Tn | aph(3')-III / ant(6)-Ia | - | 1346347..1352273 | 5926 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|