Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
| Location | 24107..24641 | Replicon | plasmid paPv7 |
| Accession | NZ_CP123511 | ||
| Organism | Arsenophonus nasoniae strain aPv | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QE210_RS20675 | Protein ID | WP_135678429.1 |
| Coordinates | 24360..24641 (+) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | QE210_RS20670 | Protein ID | WP_280627049.1 |
| Coordinates | 24107..24373 (+) | Length | 89 a.a. |
Genomic Context
Location: 24107..24373 (267 bp)
Type: Antitoxin
Protein ID: WP_280627049.1
Type: Antitoxin
Protein ID: WP_280627049.1
Location: 24360..24641 (282 bp)
Type: Toxin
Protein ID: WP_135678429.1
Type: Toxin
Protein ID: WP_135678429.1
Location: 19162..20130 (969 bp)
Type: Others
Protein ID: WP_280626642.1
Type: Others
Protein ID: WP_280626642.1
Location: 20134..20613 (480 bp)
Type: Others
Protein ID: WP_280627040.1
Type: Others
Protein ID: WP_280627040.1
Location: 20613..21800 (1188 bp)
Type: Others
Protein ID: WP_280627101.1
Type: Others
Protein ID: WP_280627101.1
Location: 21787..22665 (879 bp)
Type: Others
Protein ID: WP_280627045.1
Type: Others
Protein ID: WP_280627045.1
Location: 22622..24004 (1383 bp)
Type: Others
Protein ID: WP_280627047.1
Type: Others
Protein ID: WP_280627047.1
Location: 24708..25313 (606 bp)
Type: Others
Protein ID: WP_180560436.1
Type: Others
Protein ID: WP_180560436.1
Location: 25441..26874 (1434 bp)
Type: Others
Protein ID: WP_280627053.1
Type: Others
Protein ID: WP_280627053.1
Location: 26874..27467 (594 bp)
Type: Others
Protein ID: WP_280627054.1
Type: Others
Protein ID: WP_280627054.1
Location: 27730..28725 (996 bp)
Type: Others
Protein ID: WP_280627055.1
Type: Others
Protein ID: WP_280627055.1
Location: 28810..29337 (528 bp)
Type: Others
Protein ID: WP_280627057.1
Type: Others
Protein ID: WP_280627057.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QE210_RS20645 (QE210_20550) | 19162..20130 | - | 969 | WP_280626642.1 | DUF2184 domain-containing protein | - |
| QE210_RS20650 (QE210_20555) | 20134..20613 | - | 480 | WP_280627040.1 | hypothetical protein | - |
| QE210_RS20655 (QE210_20560) | 20613..21800 | - | 1188 | WP_280627101.1 | DUF2213 domain-containing protein | - |
| QE210_RS20660 (QE210_20565) | 21787..22665 | - | 879 | WP_280627045.1 | phage minor head protein | - |
| QE210_RS20665 (QE210_20570) | 22622..24004 | - | 1383 | WP_280627047.1 | DUF1073 domain-containing protein | - |
| QE210_RS20670 (QE210_20575) | 24107..24373 | + | 267 | WP_280627049.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| QE210_RS20675 (QE210_20580) | 24360..24641 | + | 282 | WP_135678429.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
| QE210_RS20680 (QE210_20585) | 24708..25313 | - | 606 | WP_180560436.1 | recombinase family protein | - |
| QE210_RS20685 (QE210_20590) | 25441..26874 | - | 1434 | WP_280627053.1 | phage terminase large subunit | - |
| QE210_RS20690 (QE210_20595) | 26874..27467 | - | 594 | WP_280627054.1 | hypothetical protein | - |
| QE210_RS20695 (QE210_20600) | 27730..28725 | - | 996 | WP_280627055.1 | tyrosine-type recombinase/integrase | - |
| QE210_RS20700 (QE210_20605) | 28810..29337 | - | 528 | WP_280627057.1 | hypothetical protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..40973 | 40973 | |
| - | flank | IS/Tn | - | - | 24708..25313 | 605 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.