Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-DnaT
Location 22672..23194 Replicon plasmid paPv6
Accession NZ_CP123510
Organism Arsenophonus nasoniae strain aPv

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QE210_RS20360 Protein ID WP_135678791.1
Coordinates 22913..23194 (+) Length 94 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QE210_RS20355 Protein ID WP_280626751.1
Coordinates 22672..22923 (+) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QE210_RS20330 (QE210_20235) 19504..19647 - 144 WP_280626757.1 hypothetical protein -
QE210_RS20335 (QE210_20240) 19734..20099 - 366 WP_026824172.1 hypothetical protein -
QE210_RS20340 (QE210_20245) 20112..20543 - 432 WP_280626755.1 hypothetical protein -
QE210_RS20345 (QE210_20250) 20553..22082 - 1530 WP_280626754.1 DUF3383 family protein -
QE210_RS20350 (QE210_20255) 22072..22605 - 534 WP_280626753.1 hypothetical protein -
QE210_RS20355 (QE210_20260) 22672..22923 + 252 WP_280626751.1 plasmid stabilization protein Antitoxin
QE210_RS20360 (QE210_20265) 22913..23194 + 282 WP_135678791.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
QE210_RS20365 (QE210_20270) 23191..23556 - 366 WP_280626749.1 hypothetical protein -
QE210_RS20370 (QE210_20275) 23553..24071 - 519 WP_280626747.1 hypothetical protein -
QE210_RS20375 (QE210_20280) 24071..24457 - 387 WP_280626746.1 DUF4054 domain-containing protein -
QE210_RS20380 (QE210_20285) 24493..24816 - 324 WP_280626745.1 collagen-like protein -
QE210_RS20385 (QE210_20290) 24922..25890 - 969 WP_280626642.1 DUF2184 domain-containing protein -
QE210_RS20390 (QE210_20295) 25894..26373 - 480 WP_280627040.1 hypothetical protein -
QE210_RS20395 (QE210_20300) 26373..26927 - 555 WP_280627042.1 hypothetical protein -
QE210_RS20400 (QE210_20305) 26933..27559 - 627 WP_280627043.1 DUF2213 domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..41477 41477


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 94 a.a.        Molecular weight: 11085.10 Da        Isoelectric Point: 10.6178

>T279019 WP_135678791.1 NZ_CP123510:22913-23194 [Arsenophonus nasoniae]
MSYSIEFEKRALKEWKKLAHPIREQFKKKLVKVLEYPHIKSAQLHGHQYRYKIKLKSSGYRLVYEVNDNKLLLLVIAVGI
RANNEVYQLASKR

Download         Length: 282 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9342.50 Da        Isoelectric Point: 3.9421

>AT279019 WP_280626751.1 NZ_CP123510:22672-22923 [Arsenophonus nasoniae]
MTYEILTSTVASITDLKRNPMGTVAEAQGNAVAILNRNEPAFYCVPPDLYAYFQELAEDTELNRIADERMKNPEFVSVNI
DEL

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References