Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) virT-relB/YafQ-RelB
Location 821856..822376 Replicon chromosome
Accession NC_018002
Organism Sulfurospirillum barnesii SES-3

Toxin (Protein)


Gene name virT Uniprot ID I3XW20
Locus tag SULBA_RS04190 Protein ID WP_014769024.1
Coordinates 821856..822128 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID I3XW21
Locus tag SULBA_RS04195 Protein ID WP_014769025.1
Coordinates 822125..822376 (-) Length 84 a.a.

Genomic Context

SULBA_RS04205SULBA_RS04210SULBA_RS04215SULBA_RS04165SULBA_RS04170SULBA_RS04175SULBA_RS04180SULBA_RS04185SULBA_RS04190SULBA_RS04195SULBA_RS04200SULBA_RS04220SULBA_RS04225
Location: 823382..823867 (486 bp)
Type: Others
Protein ID: WP_014769027.1
Location: 823991..824557 (567 bp)
Type: Others
Protein ID: WP_014769028.1
Location: 824756..825358 (603 bp)
Type: Others
Protein ID: WP_014769029.1
Location: 817549..817914 (366 bp)
Type: Others
Protein ID: WP_014769019.1
Location: 817907..818197 (291 bp)
Type: Others
Protein ID: WP_014769020.1
Location: 818247..818630 (384 bp)
Type: Others
Protein ID: WP_014769021.1
Location: 818627..820375 (1749 bp)
Type: Others
Protein ID: WP_014769022.1
Location: 820362..821699 (1338 bp)
Type: Others
Protein ID: WP_014769023.1
Location: 821856..822128 (273 bp)
Type: Toxin
Protein ID: WP_014769024.1
Location: 822125..822376 (252 bp)
Type: Antitoxin
Protein ID: WP_014769025.1
Location: 822661..823212 (552 bp)
Type: Others
Protein ID: WP_014769026.1
Location: 825383..826321 (939 bp)
Type: Others
Protein ID: WP_014769030.1
Location: 826318..827265 (948 bp)
Type: Others
Protein ID: WP_014769031.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
SULBA_RS04165817549..817914-366WP_014769019.1DUF86 domain-containing protein-
SULBA_RS04170817907..818197-291WP_014769020.1nucleotidyltransferase domain-containing protein-
SULBA_RS04175818247..818630-384WP_014769021.1DndE family protein-
SULBA_RS04180818627..820375-1749WP_014769022.1AAA family ATPase-
SULBA_RS04185820362..821699-1338WP_014769023.1DNA phosphorothioation system sulfurtransferase DndC-
SULBA_RS04190821856..822128-273WP_014769024.1type II toxin-antitoxin system YafQ family toxinToxin
SULBA_RS04195822125..822376-252WP_014769025.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
SULBA_RS04200822661..823212-552WP_014769026.1DNA-3-methyladenine glycosylase I-
SULBA_RS04205823382..823867+486WP_014769027.1CreA family protein-
SULBA_RS04210823991..824557+567WP_014769028.1YceI family protein-
SULBA_RS04215824756..825358+603WP_014769029.1TetR/AcrR family transcriptional regulator-
SULBA_RS04220825383..826321-939WP_014769030.1succinylglutamate desuccinylase/aspartoacylase family protein-
SULBA_RS04225826318..827265-948WP_014769031.1succinylglutamate desuccinylase/aspartoacylase family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(4-90)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(6-82)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10475.36 Da        Isoelectric Point: 8.9765

>T27897 WP_014769024.1 NC_018002:c822128-821856 [Sulfurospirillum barnesii SES-3]
MTYAIFRTSSFKKAYKKLASPEQELVLMIVLKLANGENLDEKYKDHFLIGNYKGCRECHIKPDLLLIYKINNDEVELVLV
EVGKHSKLFK

Download         Length: 273 bp

>T27897 NC_018002:c822128-821856 [Sulfurospirillum barnesii SES-3]
ATGACATACGCTATCTTTCGTACCTCTTCTTTCAAAAAAGCCTACAAAAAGCTCGCTTCGCCTGAGCAAGAACTTGTTTT
AATGATTGTTTTAAAACTTGCTAACGGTGAAAATTTGGATGAAAAATACAAAGATCATTTTCTAATAGGCAATTACAAAG
GATGCAGGGAGTGTCACATTAAACCCGACTTACTGCTCATCTACAAAATCAATAACGATGAAGTGGAATTGGTTTTGGTA
GAGGTTGGTAAGCATTCTAAATTGTTTAAATAA

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9426.93 Da        Isoelectric Point: 6.3502

>AT27897 WP_014769025.1 NC_018002:c822376-822125 [Sulfurospirillum barnesii SES-3]
MRTGTSVRIDEETKIIASEVLKQYGLSLSEGINLFCRQVAMTYSIPFELKVPTERMKKALKELEKREGKSFDSIEALKAD
LES

Download         Length: 252 bp

>AT27897 NC_018002:c822376-822125 [Sulfurospirillum barnesii SES-3]
ATGAGAACAGGAACCAGTGTTCGTATTGATGAAGAGACAAAGATTATTGCTTCAGAAGTGTTAAAACAGTATGGTCTGAG
CCTGAGTGAAGGCATCAACCTTTTTTGTAGGCAAGTTGCGATGACGTATTCGATTCCCTTTGAATTAAAAGTACCAACAG
AACGCATGAAAAAAGCACTCAAAGAGCTAGAAAAAAGGGAAGGAAAATCCTTTGATTCCATCGAAGCACTCAAAGCTGAT
CTTGAGTCATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBI3XW20

Antitoxin

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Source
ID
Structure
AlphaFold DBI3XW21

References