Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 2835012..2835958 Replicon chromosome
Accession NZ_CP122961
Organism Halomonas alkaliantarctica strain MSP3

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag QEN58_RS12950 Protein ID WP_280104048.1
Coordinates 2835012..2835530 (-) Length 173 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag QEN58_RS12955 Protein ID WP_280104049.1
Coordinates 2835527..2835958 (-) Length 144 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QEN58_RS12930 (QEN58_12930) 2830624..2831139 - 516 WP_280104044.1 5-(carboxyamino)imidazole ribonucleotide mutase -
QEN58_RS12935 (QEN58_12935) 2831360..2831632 + 273 WP_280104045.1 XRE family transcriptional regulator -
QEN58_RS12940 (QEN58_12940) 2831921..2833114 - 1194 WP_280104046.1 chromate efflux transporter -
QEN58_RS12945 (QEN58_12945) 2833227..2834909 - 1683 WP_280104047.1 dihydroxy-acid dehydratase -
QEN58_RS12950 (QEN58_12950) 2835012..2835530 - 519 WP_280104048.1 RES domain-containing protein Toxin
QEN58_RS12955 (QEN58_12955) 2835527..2835958 - 432 WP_280104049.1 DUF2384 domain-containing protein Antitoxin
QEN58_RS12960 (QEN58_12960) 2836134..2839772 + 3639 WP_280104050.1 exodeoxyribonuclease V subunit gamma -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-166)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 173 a.a.        Molecular weight: 19460.12 Da        Isoelectric Point: 4.7752

>T278302 WP_280104048.1 NZ_CP122961:c2835530-2835012 [Halomonas alkaliantarctica]
MILLPELKTQAYRVHVPRWAFSPTSGAGAREYGGRLNRVGVDALYLSLEEQTALAEYKQLSALMPPGLIVSYTVSVTNIV
DFRSGYHSKWDSLWQELSCDWRKYWFNQRIEPPSWLLGDMALEQGAKGILFPSLACGLGINLVLYTETLTESDTLEVYDP
QGDLPRDGRSWQ

Download         Length: 519 bp

Antitoxin


Download         Length: 144 a.a.        Molecular weight: 15912.97 Da        Isoelectric Point: 6.4875

>AT278302 WP_280104049.1 NZ_CP122961:c2835958-2835527 [Halomonas alkaliantarctica]
MAMGNVKESLNEPSGYLVPDSFERFLADLKAVAREERHPLINPKLFASALSIDIQTLASQAHVHRTTISRAQGAEKLQRY
LRDALRVLGAAADINGDFHDALFWFRNEPLSAFDYKTPEQLVSEGRSNDLLRYVQSLQAGVAG

Download         Length: 432 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References