Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsxAB/Xre(antitoxin) |
Location | 51932..52433 | Replicon | plasmid unnamed3 |
Accession | NZ_CP122804 | ||
Organism | Escherichia coli strain ETEC1734 |
Toxin (Protein)
Gene name | TsxA | Uniprot ID | A0A6X6XTU7 |
Locus tag | QDX84_RS26840 | Protein ID | WP_000702245.1 |
Coordinates | 51932..52192 (+) | Length | 87 a.a. |
Antitoxin (Protein)
Gene name | TsxB | Uniprot ID | - |
Locus tag | QDX84_RS26845 | Protein ID | WP_000931278.1 |
Coordinates | 52182..52433 (+) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QDX84_RS26805 (47939) | 47939..48286 | - | 348 | WP_000624618.1 | IS66 family insertion sequence element accessory protein TnpB | - |
QDX84_RS26810 (48286) | 48286..48936 | - | 651 | WP_000993956.1 | IS66-like element accessory protein TnpA | - |
QDX84_RS26815 (49024) | 49024..49479 | - | 456 | Protein_62 | division plane positioning ATPase MipZ | - |
QDX84_RS26820 (50077) | 50077..50406 | + | 330 | WP_000855121.1 | hypothetical protein | - |
QDX84_RS26825 (50985) | 50985..51308 | + | 324 | WP_000427402.1 | hypothetical protein | - |
QDX84_RS26830 (51349) | 51349..51558 | + | 210 | WP_000866037.1 | hypothetical protein | - |
QDX84_RS26835 (51656) | 51656..51880 | + | 225 | WP_000814383.1 | hypothetical protein | - |
QDX84_RS26840 (51932) | 51932..52192 | + | 261 | WP_000702245.1 | hypothetical protein | Toxin |
QDX84_RS26845 (52182) | 52182..52433 | + | 252 | WP_000931278.1 | transcriptional regulator | Antitoxin |
QDX84_RS26850 (52982) | 52982..53260 | + | 279 | WP_000545937.1 | hypothetical protein | - |
QDX84_RS26855 (53725) | 53725..53973 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | - |
QDX84_RS26860 (53970) | 53970..54317 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | - |
QDX84_RS26865 (54528) | 54528..55736 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
QDX84_RS26870 (55717) | 55717..55989 | - | 273 | WP_000019163.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Mobilizable plasmid | aadA5 / sul2 | - | 1..79114 | 79114 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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