Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 841119..841684 Replicon chromosome
Accession NZ_CP121445
Organism Anaerocolumna sp. AGMB13025

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QA584_RS03595 Protein ID WP_278273135.1
Coordinates 841119..841409 (-) Length 97 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QA584_RS03600 Protein ID WP_278273136.1
Coordinates 841406..841684 (-) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QA584_RS03580 (QA584_03580) 838334..839404 + 1071 WP_278273132.1 ABC transporter permease -
QA584_RS03585 (QA584_03585) 839506..840183 + 678 WP_278273133.1 ABC transporter ATP-binding protein -
QA584_RS03590 (QA584_03590) 840786..840989 + 204 WP_278273134.1 MazG-like family protein -
QA584_RS03595 (QA584_03595) 841119..841409 - 291 WP_278273135.1 type II toxin-antitoxin system YafQ family toxin Toxin
QA584_RS03600 (QA584_03600) 841406..841684 - 279 WP_278273136.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
QA584_RS03605 (QA584_03605) 841807..842262 - 456 WP_278273137.1 GNAT family N-acetyltransferase -
QA584_RS03610 (QA584_03610) 842917..844677 + 1761 WP_278273138.1 DUF2075 domain-containing protein -
QA584_RS03615 (QA584_03615) 844684..845019 + 336 WP_278273139.1 nucleotide pyrophosphohydrolase -
QA584_RS03620 (QA584_03620) 845279..846268 - 990 WP_278273140.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(5-94)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(4-90)


Sequences

Toxin        


Download         Length: 97 a.a.        Molecular weight: 11055.80 Da        Isoelectric Point: 7.3580

>T276341 WP_278273135.1 NZ_CP121445:c841409-841119 [Anaerocolumna sp. AGMB13025]
MRETKLTVKLTTQFKKDYKLAMKRGLNISLLEDVITQLAMSEALPEKNKDHALSGDWVGHRECHIQPDWLLVYRVDDDVL
VLTLTRTGTHSDMFGK

Download         Length: 291 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 10249.61 Da        Isoelectric Point: 4.5112

>AT276341 WP_278273136.1 NZ_CP121445:c841684-841406 [Anaerocolumna sp. AGMB13025]
MAGTTTNISIRMDSELKAQADELFNELGMNLTTAFNIFVRQSLREGGIPFEIKADRPNKETIAAILEAERNAKDPSVKGY
TDLDELFADLKK

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References