Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3254633..3255286 Replicon chromosome
Accession NZ_CP121375
Organism Acinetobacter baumannii strain LRT

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag P9J63_RS15940 Protein ID WP_032036174.1
Coordinates 3254633..3255022 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag P9J63_RS15945 Protein ID WP_001288210.1
Coordinates 3255029..3255286 (-) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P9J63_RS15925 (P9J63_15925) 3250491..3252545 + 2055 WP_004839673.1 M3 family metallopeptidase -
P9J63_RS15930 (P9J63_15930) 3252586..3252795 + 210 WP_032037922.1 YheV family putative zinc ribbon protein -
P9J63_RS15935 (P9J63_15935) 3252914..3253846 - 933 WP_001040037.1 IS5-like element ISAha2 family transposase -
P9J63_RS15940 (P9J63_15940) 3254633..3255022 - 390 WP_032036174.1 membrane protein Toxin
P9J63_RS15945 (P9J63_15945) 3255029..3255286 - 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
P9J63_RS15950 (P9J63_15950) 3255474..3256646 + 1173 WP_031961342.1 acyl-CoA dehydrogenase family protein -
P9J63_RS15955 (P9J63_15955) 3256695..3258185 - 1491 WP_032036176.1 NAD(P)/FAD-dependent oxidoreductase -
P9J63_RS15960 (P9J63_15960) 3258367..3258744 - 378 WP_001216380.1 50S ribosomal protein L17 -
P9J63_RS15965 (P9J63_15965) 3258763..3259770 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 3252914..3253846 932


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15641.96 Da        Isoelectric Point: 10.5620

>T276337 WP_032036174.1 NZ_CP121375:c3255022-3254633 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLTQIAYLDKKLWSLAYQSQNTV
SRVKILKIIDYQIFIVIYFEGHKTLTSIIWFDQMSLAKWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT276337 WP_001288210.1 NZ_CP121375:c3255286-3255029 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References