Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 563313..563829 Replicon chromosome
Accession NZ_CP121145
Organism Klebsiella pneumoniae strain UHD-56_PH

Toxin (Protein)


Gene name relE Uniprot ID R4YAY3
Locus tag P8T43_RS02695 Protein ID WP_004178374.1
Coordinates 563545..563829 (+) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID R4Y888
Locus tag P8T43_RS02690 Protein ID WP_002886901.1
Coordinates 563313..563555 (+) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P8T43_RS02675 (P8T43_02675) 559341..560081 + 741 WP_004186692.1 KDGP aldolase family protein -
P8T43_RS02680 (P8T43_02680) 560148..561302 + 1155 WP_032415878.1 lactonase family protein -
P8T43_RS02685 (P8T43_02685) 561325..563235 + 1911 WP_009486549.1 PRD domain-containing protein -
P8T43_RS02690 (P8T43_02690) 563313..563555 + 243 WP_002886901.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
P8T43_RS02695 (P8T43_02695) 563545..563829 + 285 WP_004178374.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
P8T43_RS02700 (P8T43_02700) 563833..564297 - 465 WP_004178375.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
P8T43_RS02705 (P8T43_02705) 564626..566764 - 2139 WP_032415880.1 anaerobic ribonucleoside-triphosphate reductase -
P8T43_RS02710 (P8T43_02710) 567121..567864 - 744 WP_002886905.1 MurR/RpiR family transcriptional regulator -
P8T43_RS02715 (P8T43_02715) 567867..568040 - 174 WP_004222159.1 hypothetical protein -
P8T43_RS02720 (P8T43_02720) 568170..568433 + 264 WP_004152271.1 PTS sugar transporter subunit IIB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-80)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11155.97 Da        Isoelectric Point: 10.3787

>T275839 WP_004178374.1 NZ_CP121145:563545-563829 [Klebsiella pneumoniae]
MTYELEFDPRAWREWQKPGETVKKQFKNKLQQIVQNPRIESTRLSDLPDCYKIKLKASGYRLVYQVRDSVVVVYVIAIGK
REKAAVYHQANKRL

Download         Length: 285 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9045.55 Da        Isoelectric Point: 6.3340

>AT275839 WP_002886901.1 NZ_CP121145:563313-563555 [Klebsiella pneumoniae]
MATLNVRLDDKLKKEAYAVLEKLDMTPTEAVRLLFQYIAENGRMPVKSMTISDGEAALLRTVRERLENPRPGVKVSLDDL

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A6THG1

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GLP0

References