Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2333250..2334838 Replicon chromosome
Accession NZ_CP121139
Organism Klebsiella pneumoniae strain UHD-4_PH

Toxin (Protein)


Gene name hipA Uniprot ID -
Locus tag P8T35_RS11065 Protein ID WP_032414910.1
Coordinates 2333516..2334838 (+) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag P8T35_RS11060 Protein ID WP_002904790.1
Coordinates 2333250..2333516 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P8T35_RS11035 (P8T35_11035) 2328400..2329323 + 924 WP_002904781.1 LysR family hpxDE operon transcriptional regulator HpxR -
P8T35_RS11040 (P8T35_11040) 2329304..2330458 - 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
P8T35_RS11045 (P8T35_11045) 2330804..2332183 + 1380 WP_004184021.1 nucleobase:cation symporter-2 family protein -
P8T35_RS11050 (P8T35_11050) 2332161..2332661 + 501 WP_032414907.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
P8T35_RS11055 (P8T35_11055) 2332658..2332984 + 327 WP_032414908.1 hydroxyisourate hydrolase -
P8T35_RS11060 (P8T35_11060) 2333250..2333516 + 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
P8T35_RS11065 (P8T35_11065) 2333516..2334838 + 1323 WP_032414910.1 type II toxin-antitoxin system HipA family toxin Toxin
P8T35_RS11070 (P8T35_11070) 2334855..2336147 - 1293 WP_032414911.1 glycoside hydrolase family 10 protein -
P8T35_RS11075 (P8T35_11075) 2336289..2337293 - 1005 WP_004176196.1 fimbrial protein -
P8T35_RS11080 (P8T35_11080) 2337281..2339782 - 2502 WP_032414912.1 fimbria/pilus outer membrane usher protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(16-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49150.45 Da        Isoelectric Point: 7.5618

>T275796 WP_032414910.1 NZ_CP121139:2333516-2334838 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITGHDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPREQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT275796 WP_002904790.1 NZ_CP121139:2333250-2333516 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References