Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 1892599..1893409 Replicon chromosome
Accession NZ_CP121135
Organism Klebsiella pneumoniae strain UHD-41_PH

Toxin (Protein)


Gene name KacT Uniprot ID A0A060VJ83
Locus tag P8T41_RS09190 Protein ID WP_004178461.1
Coordinates 1892876..1893409 (+) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag P8T41_RS09185 Protein ID WP_002887278.1
Coordinates 1892599..1892865 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P8T41_RS09165 (P8T41_09165) 1888470..1888814 - 345 WP_116288284.1 cation efflux system protein CusF -
P8T41_RS09170 (P8T41_09170) 1888832..1890217 - 1386 WP_026005908.1 efflux transporter outer membrane subunit -
P8T41_RS09175 (P8T41_09175) 1890390..1891073 + 684 WP_002887273.1 copper response regulator transcription factor CusR -
P8T41_RS09180 (P8T41_09180) 1891063..1892496 + 1434 WP_032415907.1 Cu(+)/Ag(+) sensor histidine kinase -
P8T41_RS09185 (P8T41_09185) 1892599..1892865 + 267 WP_002887278.1 type II toxin-antitoxin system antitoxin KacA Antitoxin
P8T41_RS09190 (P8T41_09190) 1892876..1893409 + 534 WP_004178461.1 type II toxin-antitoxin system toxin KacT Toxin
P8T41_RS09195 (P8T41_09195) 1893457..1894578 - 1122 WP_012737335.1 cupin domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19810.65 Da        Isoelectric Point: 5.2614

>T275769 WP_004178461.1 NZ_CP121135:1892876-1893409 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHAMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT275769 WP_002887278.1 NZ_CP121135:1892599-1892865 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A060VJ83

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References