Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pasABC/RelE-HTH
Location 3133263..3133737 Replicon chromosome
Accession NZ_CP120970
Organism Moellerella wisconsensis strain XJ22MSE1

Toxin (Protein)


Gene name pasB Uniprot ID -
Locus tag P6F44_RS13750 Protein ID WP_047257106.1
Coordinates 3133263..3133529 (-) Length 89 a.a.

Antitoxin (Protein)


Gene name pasA Uniprot ID -
Locus tag P6F44_RS13755 Protein ID WP_047257105.1
Coordinates 3133513..3133737 (-) Length 75 a.a.

Genomic Context

P6F44_RS13740P6F44_RS13745P6F44_RS13760P6F44_RS13730P6F44_RS13735P6F44_RS13750P6F44_RS13755P6F44_RS13770P6F44_RS13775P6F44_RS13780P6F44_RS13785P6F44_RS13790
Location: 3131412..3131627 (216 bp)
Type: Others
Protein ID: WP_047257108.1
Location: 3131649..3132776 (1128 bp)
Type: Others
Protein ID: WP_047257107.1
Location: 3133927..3134055 (129 bp)
Type: Others
Protein ID: WP_269430907.1
Location: 3128583..3129497 (915 bp)
Type: Others
Protein ID: WP_277850218.1
Location: 3129527..3131128 (1602 bp)
Type: Others
Protein ID: WP_277850219.1
Location: 3133263..3133529 (267 bp)
Type: Toxin
Protein ID: WP_047257106.1
Location: 3133513..3133737 (225 bp)
Type: Antitoxin
Protein ID: WP_047257105.1
Location: 3135542..3136318 (777 bp)
Type: Others
Protein ID: WP_277850221.1
Location: 3136521..3136739 (219 bp)
Type: Others
Protein ID: WP_277850222.1
Location: 3136977..3137753 (777 bp)
Type: Others
Protein ID: WP_277850223.1
Location: 3137734..3137907 (174 bp)
Type: Others
Protein ID: WP_277850224.1
Location: 3137956..3138138 (183 bp)
Type: Others
Protein ID: WP_277850225.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
P6F44_RS137303128583..3129497-915WP_277850218.1ribonuclease Z-
P6F44_RS137353129527..3131128-1602WP_277850219.1RNA repair transcriptional activator RtcR-
P6F44_RS137403131412..3131627+216WP_047257108.1hypothetical protein-
P6F44_RS137453131649..3132776+1128WP_047257107.1slipin family protein-
P6F44_RS137503133263..3133529-267WP_047257106.1type II toxin-antitoxin system RelE/ParE family toxinToxin
P6F44_RS137553133513..3133737-225WP_047257105.1TraY domain-containing proteinAntitoxin
P6F44_RS137603133927..3134055+129WP_269430907.1hypothetical protein-
P6F44_RS137703135542..3136318-777WP_277850221.1hypothetical protein-
P6F44_RS137753136521..3136739-219WP_277850222.1hypothetical protein-
P6F44_RS137803136977..3137753-777WP_277850223.1hypothetical protein-
P6F44_RS137853137734..3137907-174WP_277850224.1hypothetical protein-
P6F44_RS137903137956..3138138-183WP_277850225.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-flankIS/Tn--3134134..3134937803


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-87)

Antitoxin

Relaxosome protein TraY

(4-45)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10416.09 Da        Isoelectric Point: 9.5211

>T275494 WP_047257106.1 NZ_CP120970:c3133529-3133263 [Moellerella wisconsensis]
MVWTINYSERALKSLRKMDKQSARRIVDFMGLRIAALDDPRQLGKSLKGELGEFWRYRVGDYRILCEIRDDELVILAATI
GHRREIYE

Download         Length: 267 bp

Antitoxin


Download         Length: 75 a.a.        Molecular weight: 8470.51 Da        Isoelectric Point: 4.5201

>AT275494 WP_047257105.1 NZ_CP120970:c3133737-3133513 [Moellerella wisconsensis]
MLAIRLSDDIETRLESLAKQTGRTKTFYAREAILTHLEDLEDYYLSAETIAKIRSGEELIHSSEEVRKTLGLDD

Download         Length: 225 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References