Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) parDE/ParE-CC2985
Location 4526..5070 Replicon plasmid unnamed2
Accession NZ_CP120865
Organism Roseibium sp. KMA01

Toxin (Protein)


Gene name parE Uniprot ID -
Locus tag K1718_RS27375 Protein ID WP_265684724.1
Coordinates 4526..4813 (-) Length 96 a.a.

Antitoxin (Protein)


Gene name parD Uniprot ID -
Locus tag K1718_RS27380 Protein ID WP_265684723.1
Coordinates 4810..5070 (-) Length 87 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K1718_RS27350 (K1718_27350) 1188..1652 + 465 WP_265684729.1 hypothetical protein -
K1718_RS27355 (K1718_27355) 1674..2510 + 837 WP_265684728.1 hypothetical protein -
K1718_RS27360 (K1718_27360) 2833..3564 - 732 WP_265684727.1 hypothetical protein -
K1718_RS27365 (K1718_27365) 3697..4104 - 408 WP_265684726.1 hypothetical protein -
K1718_RS27370 (K1718_27370) 4111..4494 - 384 WP_265684725.1 hypothetical protein -
K1718_RS27375 (K1718_27375) 4526..4813 - 288 WP_265684724.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
K1718_RS27380 (K1718_27380) 4810..5070 - 261 WP_265684723.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin
K1718_RS27385 (K1718_27385) 5276..5701 - 426 WP_265684722.1 hypothetical protein -
K1718_RS27390 (K1718_27390) 5691..6698 - 1008 WP_265684748.1 MobA/MobL family protein -
K1718_RS27395 (K1718_27395) 7122..7970 + 849 WP_265684747.1 hypothetical protein -
K1718_RS27400 (K1718_27400) 8135..9142 + 1008 WP_265684746.1 hypothetical protein -
K1718_RS27405 (K1718_27405) 9146..9775 - 630 WP_265684745.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..22955 22955


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(4-88)

Antitoxin

(5-85)


Sequences


Toxin        


Download         Length: 96 a.a.        Molecular weight: 10955.42 Da        Isoelectric Point: 6.9761

>T275434 WP_265684724.1 NZ_CP120865:c4813-4526 [Roseibium sp. KMA01]
MTGYKLSLAAQADLISIALYGDERHGVEQSDHYRDQLSAHFEILAKQPMLYPAVDHIRQGYRRSLCGVHSVYYRITDRGV
EIMRIIGRQDFTNEV

Download         Length: 288 bp


Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9967.18 Da        Isoelectric Point: 4.7389

>AT275434 WP_265684723.1 NZ_CP120865:c5070-4810 [Roseibium sp. KMA01]
MSMVKKSISVTDQQDEWIRAEVAKGYYGNDSEVIRALIRERQLQQQETPEQIEAIRAKLIEAERSGFADKSVKEIWEEAR
QQAKAE

Download         Length: 261 bp


Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References