Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | parDE/ParE-CC2985 |
Location | 4526..5070 | Replicon | plasmid unnamed2 |
Accession | NZ_CP120865 | ||
Organism | Roseibium sp. KMA01 |
Toxin (Protein)
Gene name | parE | Uniprot ID | - |
Locus tag | K1718_RS27375 | Protein ID | WP_265684724.1 |
Coordinates | 4526..4813 (-) | Length | 96 a.a. |
Antitoxin (Protein)
Gene name | parD | Uniprot ID | - |
Locus tag | K1718_RS27380 | Protein ID | WP_265684723.1 |
Coordinates | 4810..5070 (-) | Length | 87 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K1718_RS27350 (K1718_27350) | 1188..1652 | + | 465 | WP_265684729.1 | hypothetical protein | - |
K1718_RS27355 (K1718_27355) | 1674..2510 | + | 837 | WP_265684728.1 | hypothetical protein | - |
K1718_RS27360 (K1718_27360) | 2833..3564 | - | 732 | WP_265684727.1 | hypothetical protein | - |
K1718_RS27365 (K1718_27365) | 3697..4104 | - | 408 | WP_265684726.1 | hypothetical protein | - |
K1718_RS27370 (K1718_27370) | 4111..4494 | - | 384 | WP_265684725.1 | hypothetical protein | - |
K1718_RS27375 (K1718_27375) | 4526..4813 | - | 288 | WP_265684724.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
K1718_RS27380 (K1718_27380) | 4810..5070 | - | 261 | WP_265684723.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin |
K1718_RS27385 (K1718_27385) | 5276..5701 | - | 426 | WP_265684722.1 | hypothetical protein | - |
K1718_RS27390 (K1718_27390) | 5691..6698 | - | 1008 | WP_265684748.1 | MobA/MobL family protein | - |
K1718_RS27395 (K1718_27395) | 7122..7970 | + | 849 | WP_265684747.1 | hypothetical protein | - |
K1718_RS27400 (K1718_27400) | 8135..9142 | + | 1008 | WP_265684746.1 | hypothetical protein | - |
K1718_RS27405 (K1718_27405) | 9146..9775 | - | 630 | WP_265684745.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | - | - | 1..22955 | 22955 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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