274599

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pasABC/RelE-HTH
Location 655032..655509 Replicon chromosome
Accession NZ_CP120230
Organism Rhizobium croatiense strain MC77

Toxin (Protein)


Gene name pasB Uniprot ID -
Locus tag PYR68_RS03220 Protein ID WP_097579923.1
Coordinates 655240..655509 (+) Length 90 a.a.

Antitoxin (Protein)


Gene name pasA Uniprot ID -
Locus tag PYR68_RS03215 Protein ID WP_097579924.1
Coordinates 655032..655256 (+) Length 75 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PYR68_RS03180 (PYR68_03180) 650039..650368 + 330 WP_097579930.1 NIPSNAP family protein -
PYR68_RS03185 (PYR68_03185) 650365..650715 + 351 WP_097579929.1 antibiotic biosynthesis monooxygenase -
PYR68_RS03190 (PYR68_03190) 650835..651977 + 1143 WP_097579928.1 site-specific DNA-methyltransferase -
PYR68_RS03195 (PYR68_03195) 652091..652456 - 366 WP_097579927.1 nuclear transport factor 2 family protein -
PYR68_RS03200 (PYR68_03200) 652460..653074 - 615 WP_097579926.1 HAD family phosphatase -
PYR68_RS03205 (PYR68_03205) 653077..654180 - 1104 WP_097579925.1 A/G-specific adenine glycosylase -
PYR68_RS03210 (PYR68_03210) 654277..654771 + 495 WP_097580090.1 DUF721 domain-containing protein -
PYR68_RS03215 (PYR68_03215) 655032..655256 + 225 WP_097579924.1 DUF6290 family protein Antitoxin
PYR68_RS03220 (PYR68_03220) 655240..655509 + 270 WP_097579923.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
PYR68_RS03225 (PYR68_03225) 655657..656433 + 777 WP_097579922.1 DsbA family protein -
PYR68_RS03230 (PYR68_03230) 656689..660150 + 3462 WP_276486336.1 chromosome segregation protein SMC -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-88)

Antitoxin

Relaxosome protein TraY

(4-49)


Sequences

Toxin        


Download         Length: 90 a.a.        Molecular weight: 10479.97 Da        Isoelectric Point: 10.4070

>T274599 WP_097579923.1 NZ_CP120230:655240-655509 [Rhizobium croatiense]
MAWRIEFHRAAERELEKLGHEAARRILRFLNDRVARLDDPRSIGEALKGSEPGDFWKYRVGDYRVITSIDDGAVRILIVR
IGNRRDVYR

Download         Length: 270 bp

Antitoxin


Download         Length: 75 a.a.        Molecular weight: 8611.75 Da        Isoelectric Point: 4.8894

>AT274599 WP_097579924.1 NZ_CP120230:655032-655256 [Rhizobium croatiense]
MLALRLPPEIEARLDELSKRTGRSKSFYARQAILEHLDDLEDIYLAEKRLEELRRGESDTVSLSELMTRHGVEN

Download         Length: 225 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References