Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-DinJ |
Location | 443342..443858 | Replicon | chromosome |
Accession | NZ_CP119986 | ||
Organism | Salmonella enterica strain CRIN514780 |
Toxin (Protein)
Gene name | relE | Uniprot ID | A0A623NIH5 |
Locus tag | P2V97_RS02105 | Protein ID | WP_023993574.1 |
Coordinates | 443574..443858 (+) | Length | 95 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | A0A633LVJ8 |
Locus tag | P2V97_RS02100 | Protein ID | WP_023993575.1 |
Coordinates | 443342..443584 (+) | Length | 81 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
P2V97_RS02080 (438362) | 438362..439495 | + | 1134 | WP_023993579.1 | amidohydrolase/deacetylase family metallohydrolase | - |
P2V97_RS02085 (439479) | 439479..440597 | + | 1119 | WP_023993578.1 | DgaE family pyridoxal phosphate-dependent ammonia lyase | - |
P2V97_RS02090 (440594) | 440594..441334 | + | 741 | WP_023993577.1 | KDGP aldolase family protein | - |
P2V97_RS02095 (441351) | 441351..443264 | + | 1914 | WP_023993576.1 | BglG family transcription antiterminator | - |
P2V97_RS02100 (443342) | 443342..443584 | + | 243 | WP_023993575.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
P2V97_RS02105 (443574) | 443574..443858 | + | 285 | WP_023993574.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
P2V97_RS02110 (443862) | 443862..444326 | - | 465 | WP_023993573.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
P2V97_RS02115 (444543) | 444543..446681 | - | 2139 | WP_000187818.1 | anaerobic ribonucleoside-triphosphate reductase | - |
P2V97_RS02120 (447090) | 447090..448742 | - | 1653 | WP_023993572.1 | alpha,alpha-phosphotrehalase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A623NIH5 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A633LVJ8 |