Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) KacT-ataR/DUF1778(antitoxin)
Location 353121..353924 Replicon chromosome
Accession NZ_CP119754
Organism Superficieibacter sp. HKU1

Toxin (Protein)


Gene name KacT Uniprot ID -
Locus tag P0H77_RS01680 Protein ID WP_276161710.1
Coordinates 353394..353924 (+) Length 177 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag P0H77_RS01675 Protein ID WP_176919441.1
Coordinates 353121..353390 (+) Length 90 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P0H77_RS01660 (P0H77_01660) 349149..350003 + 855 WP_176919445.1 RNA polymerase sigma factor RpoH -
P0H77_RS01665 (P0H77_01665) 350179..351444 + 1266 WP_276161694.1 4-aminobutyrate--2-oxoglutarate transaminase -
P0H77_RS01670 (P0H77_01670) 351662..352765 + 1104 WP_103675794.1 branched chain amino acid ABC transporter substrate-binding protein LivJ -
P0H77_RS01675 (P0H77_01675) 353121..353390 + 270 WP_176919441.1 DUF1778 domain-containing protein Antitoxin
P0H77_RS01680 (P0H77_01680) 353394..353924 + 531 WP_276161710.1 GNAT family N-acetyltransferase Toxin
P0H77_RS01685 (P0H77_01685) 353937..355946 - 2010 WP_276161714.1 DUF2207 domain-containing protein -
P0H77_RS01690 (P0H77_01690) 356250..356633 - 384 WP_276161728.1 aspartate 1-decarboxylase autocleavage activator PanM -
P0H77_RS01695 (P0H77_01695) 357056..358165 + 1110 WP_276161734.1 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(94-150)

Antitoxin

Vibrio phage ICP1, Orf50

(4-88)


Sequences

Toxin        


Download         Length: 177 a.a.        Molecular weight: 19668.52 Da        Isoelectric Point: 7.0493

>T274426 WP_276161710.1 NZ_CP119754:353394-353924 [Superficieibacter sp. HKU1]
VDELIIELFADATEYNLNEFDCGEETLNRFLFEHLSRQHHRKILRGYVLRTTGPVPAVLGYYTLSGSCFEKASLPSKTQQ
KQIPYRNVPSITLGRLAVDKRLQGQGWGTMLVTHAMKVIFGASQTVGIHGMFVEALNDNARAFYLSLGFIPLSGENNHAL
FYPVKSIESLFASDIA

Download         Length: 531 bp

Antitoxin


Download         Length: 90 a.a.        Molecular weight: 10303.86 Da        Isoelectric Point: 8.7676

>AT274426 WP_176919441.1 NZ_CP119754:353121-353390 [Superficieibacter sp. HKU1]
MPVLKKQRIDLRLSDDDKGMIEEAAVLTNQTITQFMLRSASERAAQVIEQHRRMVLNDESWARVMDALSNPPEPNEKLKK
AARRLQNME

Download         Length: 270 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References