Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pasABC/RelE-HTH
Location 1809687..1810173 Replicon chromosome
Accession NZ_CP119566
Organism Pararhizobium sp. T808

Toxin (Protein)


Gene name pasB Uniprot ID -
Locus tag PYR65_RS08750 Protein ID WP_276121008.1
Coordinates 1809916..1810173 (+) Length 86 a.a.

Antitoxin (Protein)


Gene name pasA Uniprot ID -
Locus tag PYR65_RS08745 Protein ID WP_276120688.1
Coordinates 1809687..1809920 (+) Length 78 a.a.

Genomic Context

PYR65_RS08730PYR65_RS08735PYR65_RS08740PYR65_RS08745PYR65_RS08750PYR65_RS08755PYR65_RS08760PYR65_RS08765PYR65_RS08770
Location: 1805246..1806334 (1089 bp)
Type: Others
Protein ID: WP_060637043.1
Location: 1806531..1807679 (1149 bp)
Type: Others
Protein ID: WP_276120686.1
Location: 1807683..1809599 (1917 bp)
Type: Others
Protein ID: WP_276120687.1
Location: 1809687..1809920 (234 bp)
Type: Antitoxin
Protein ID: WP_276120688.1
Location: 1809916..1810173 (258 bp)
Type: Toxin
Protein ID: WP_276121008.1
Location: 1810204..1811505 (1302 bp)
Type: Others
Protein ID: WP_276120689.1
Location: 1811498..1812625 (1128 bp)
Type: Others
Protein ID: WP_276120690.1
Location: 1812809..1814488 (1680 bp)
Type: Others
Protein ID: WP_276120691.1
Location: 1814548..1815057 (510 bp)
Type: Others
Protein ID: WP_060637051.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
PYR65_RS087301805246..1806334+1089WP_060637043.1hypothetical protein-
PYR65_RS087351806531..1807679+1149WP_276120686.1hypothetical protein-
PYR65_RS087401807683..1809599+1917WP_276120687.1AAA family ATPase-
PYR65_RS087451809687..1809920+234WP_276120688.1DUF6290 family proteinAntitoxin
PYR65_RS087501809916..1810173+258WP_276121008.1type II toxin-antitoxin system RelE/ParE family toxinToxin
PYR65_RS087551810204..1811505+1302WP_276120689.1hypothetical protein-
PYR65_RS087601811498..1812625+1128WP_276120690.1DUF2333 family protein-
PYR65_RS087651812809..1814488+1680WP_276120691.1formate--tetrahydrofolate ligase-
PYR65_RS087701814548..1815057-510WP_060637051.1DUF1993 domain-containing protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(2-84)

Antitoxin

Protein of unknown function DUF6290

(6-73)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 9770.33 Da        Isoelectric Point: 10.6555

>T274195 WP_276121008.1 NZ_CP119566:1809916-1810173 [Pararhizobium sp. T808]
IDLSDAADKTLRKISKSDAKRIAGFLYQRVTALDNPRQLGQALQGSKLGDLWRYRVGDFRVLCKIQDSRLVVLVIEIGHR
RDIYR

Download         Length: 258 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 8842.97 Da        Isoelectric Point: 4.3246

>AT274195 WP_276120688.1 NZ_CP119566:1809687-1809920 [Pararhizobium sp. T808]
MAKQTAIRLSDETYERLQALAARTGRTATFYIRQAIEEHLEDLEDIYLAESVLEKIQRGEMGTRPLKEAMEELGLDD

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References