Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | pasABC/RelE-HTH |
Location | 1809687..1810173 | Replicon | chromosome |
Accession | NZ_CP119566 | ||
Organism | Pararhizobium sp. T808 |
Toxin (Protein)
Gene name | pasB | Uniprot ID | - |
Locus tag | PYR65_RS08750 | Protein ID | WP_276121008.1 |
Coordinates | 1809916..1810173 (+) | Length | 86 a.a. |
Antitoxin (Protein)
Gene name | pasA | Uniprot ID | - |
Locus tag | PYR65_RS08745 | Protein ID | WP_276120688.1 |
Coordinates | 1809687..1809920 (+) | Length | 78 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PYR65_RS08730 | 1805246..1806334 | + | 1089 | WP_060637043.1 | hypothetical protein | - |
PYR65_RS08735 | 1806531..1807679 | + | 1149 | WP_276120686.1 | hypothetical protein | - |
PYR65_RS08740 | 1807683..1809599 | + | 1917 | WP_276120687.1 | AAA family ATPase | - |
PYR65_RS08745 | 1809687..1809920 | + | 234 | WP_276120688.1 | DUF6290 family protein | Antitoxin |
PYR65_RS08750 | 1809916..1810173 | + | 258 | WP_276121008.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
PYR65_RS08755 | 1810204..1811505 | + | 1302 | WP_276120689.1 | hypothetical protein | - |
PYR65_RS08760 | 1811498..1812625 | + | 1128 | WP_276120690.1 | DUF2333 family protein | - |
PYR65_RS08765 | 1812809..1814488 | + | 1680 | WP_276120691.1 | formate--tetrahydrofolate ligase | - |
PYR65_RS08770 | 1814548..1815057 | - | 510 | WP_060637051.1 | DUF1993 domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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