Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 4579553..4580210 Replicon chromosome
Accession NZ_CP119531
Organism Raoultella electrica strain Rd210413

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag P2G42_RS21890 Protein ID WP_100684294.1
Coordinates 4579553..4579963 (-) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID A0A514ELX1
Locus tag P2G42_RS21895 Protein ID WP_004867358.1
Coordinates 4579944..4580210 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P2G42_RS21870 (P2G42_21870) 4575477..4577210 - 1734 WP_285237506.1 single-stranded-DNA-specific exonuclease RecJ -
P2G42_RS21875 (P2G42_21875) 4577216..4577929 - 714 WP_160703246.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
P2G42_RS21880 (P2G42_21880) 4577952..4578848 - 897 WP_285237507.1 site-specific tyrosine recombinase XerD -
P2G42_RS21885 (P2G42_21885) 4579026..4579547 + 522 WP_131048606.1 flavodoxin FldB -
P2G42_RS21890 (P2G42_21890) 4579553..4579963 - 411 WP_100684294.1 protein YgfX Toxin
P2G42_RS21895 (P2G42_21895) 4579944..4580210 - 267 WP_004867358.1 FAD assembly factor SdhE Antitoxin
P2G42_RS21900 (P2G42_21900) 4580507..4581490 + 984 WP_160703248.1 tRNA-modifying protein YgfZ -
P2G42_RS21905 (P2G42_21905) 4581606..4582265 - 660 WP_131048604.1 hemolysin III family protein -
P2G42_RS21910 (P2G42_21910) 4582427..4582738 - 312 WP_131048603.1 N(4)-acetylcytidine aminohydrolase -
P2G42_RS21915 (P2G42_21915) 4582788..4583516 + 729 WP_131048725.1 MurR/RpiR family transcriptional regulator -
P2G42_RS21920 (P2G42_21920) 4583636..4585069 + 1434 WP_285237508.1 6-phospho-beta-glucosidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16212.09 Da        Isoelectric Point: 11.5202

>T274172 WP_100684294.1 NZ_CP119531:c4579963-4579553 [Raoultella electrica]
VVLWQSDLRISWRSQWFSLLLHGVVAAIVLLMPWPLSYTPLWLLLLSLVVFDSVRSQRRIHACRGEIKLMTDSRLRWQKA
EWEIVGTPWVINSGMLLRLQDMQTRRRQHLWVAADSMDAREWRDLRRLVLQKPAQD

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10553.05 Da        Isoelectric Point: 4.8432

>AT274172 WP_004867358.1 NZ_CP119531:c4580210-4579944 [Raoultella electrica]
MDITNKARIHWACRRGMRELDISIMPFFEYEYDTLSDEDKQLFIRLLENDDPDLFNWLMNHGEPADAQLQRMVKLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A514ELX1

References