Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 795805..796727 Replicon chromosome
Accession NZ_CP119382
Organism Pseudomonas kermanshahensis strain Mr36

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag PZ739_RS03610 Protein ID WP_275748999.1
Coordinates 795805..796335 (-) Length 177 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag PZ739_RS03615 Protein ID WP_252826666.1
Coordinates 796332..796727 (-) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PZ739_RS03590 (PZ739_03590) 790838..792055 - 1218 WP_275748991.1 DUF3422 domain-containing protein -
PZ739_RS03595 (PZ739_03595) 792223..793653 - 1431 WP_275748993.1 aldehyde dehydrogenase family protein -
PZ739_RS03600 (PZ739_03600) 793667..795166 - 1500 WP_275748996.1 cytosine permease -
PZ739_RS03605 (PZ739_03605) 795260..795649 - 390 WP_027594495.1 nuclear transport factor 2 family protein -
PZ739_RS03610 (PZ739_03610) 795805..796335 - 531 WP_275748999.1 RES family NAD+ phosphorylase Toxin
PZ739_RS03615 (PZ739_03615) 796332..796727 - 396 WP_252826666.1 DUF2384 domain-containing protein Antitoxin
PZ739_RS03620 (PZ739_03620) 796887..797906 + 1020 WP_027594493.1 transporter -
PZ739_RS03625 (PZ739_03625) 797997..798617 + 621 WP_275749003.1 isochorismate family cysteine hydrolase YcaC -
PZ739_RS03630 (PZ739_03630) 798855..799673 + 819 WP_027594491.1 polyphosphate kinase 2 -
PZ739_RS03635 (PZ739_03635) 799710..800906 + 1197 WP_275749005.1 monovalent cation:proton antiporter-2 (CPA2) family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-166)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 177 a.a.        Molecular weight: 19454.17 Da        Isoelectric Point: 6.4770

>T274047 WP_275748999.1 NZ_CP119382:c796335-795805 [Pseudomonas kermanshahensis]
MKIIAYRNLACYRLHTPKWAIAPMSGAGAATQGGRANRKGLEALYLSLEPATAVAEFQQGSPFLPPGLLVSYSLTLDRVI
DFTGGYQEDWPPIWKDFFCDWRKIRFNEGVEPPSWLIGDLVLEADCAGIVFESVAHPGGKNLVLYTDQLPAHGSITVNDP
RGDLPKDQSSWHRPKS

Download         Length: 531 bp

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14986.05 Da        Isoelectric Point: 5.6928

>AT274047 WP_252826666.1 NZ_CP119382:c796727-796332 [Pseudomonas kermanshahensis]
MASNAVLELHPTTFEGLMEALREVNRVMFSPERFLKVFSMDQQTFAARAHVHRNTVRNAPESEKIQAYIRDAVRVLRALT
DMGTEMTKAIFWFKNEPLSTFDYKTAEEVVSEGRTEQLIAFLQSWEAGAQG

Download         Length: 396 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References