Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | slvAT/RES(toxin) |
| Location | 795805..796727 | Replicon | chromosome |
| Accession | NZ_CP119382 | ||
| Organism | Pseudomonas kermanshahensis strain Mr36 | ||
Toxin (Protein)
| Gene name | slvT | Uniprot ID | - |
| Locus tag | PZ739_RS03610 | Protein ID | WP_275748999.1 |
| Coordinates | 795805..796335 (-) | Length | 177 a.a. |
Antitoxin (Protein)
| Gene name | slvA | Uniprot ID | - |
| Locus tag | PZ739_RS03615 | Protein ID | WP_252826666.1 |
| Coordinates | 796332..796727 (-) | Length | 132 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PZ739_RS03590 (PZ739_03590) | 790838..792055 | - | 1218 | WP_275748991.1 | DUF3422 domain-containing protein | - |
| PZ739_RS03595 (PZ739_03595) | 792223..793653 | - | 1431 | WP_275748993.1 | aldehyde dehydrogenase family protein | - |
| PZ739_RS03600 (PZ739_03600) | 793667..795166 | - | 1500 | WP_275748996.1 | cytosine permease | - |
| PZ739_RS03605 (PZ739_03605) | 795260..795649 | - | 390 | WP_027594495.1 | nuclear transport factor 2 family protein | - |
| PZ739_RS03610 (PZ739_03610) | 795805..796335 | - | 531 | WP_275748999.1 | RES family NAD+ phosphorylase | Toxin |
| PZ739_RS03615 (PZ739_03615) | 796332..796727 | - | 396 | WP_252826666.1 | DUF2384 domain-containing protein | Antitoxin |
| PZ739_RS03620 (PZ739_03620) | 796887..797906 | + | 1020 | WP_027594493.1 | transporter | - |
| PZ739_RS03625 (PZ739_03625) | 797997..798617 | + | 621 | WP_275749003.1 | isochorismate family cysteine hydrolase YcaC | - |
| PZ739_RS03630 (PZ739_03630) | 798855..799673 | + | 819 | WP_027594491.1 | polyphosphate kinase 2 | - |
| PZ739_RS03635 (PZ739_03635) | 799710..800906 | + | 1197 | WP_275749005.1 | monovalent cation:proton antiporter-2 (CPA2) family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 177 a.a. Molecular weight: 19454.17 Da Isoelectric Point: 6.4770
>T274047 WP_275748999.1 NZ_CP119382:c796335-795805 [Pseudomonas kermanshahensis]
MKIIAYRNLACYRLHTPKWAIAPMSGAGAATQGGRANRKGLEALYLSLEPATAVAEFQQGSPFLPPGLLVSYSLTLDRVI
DFTGGYQEDWPPIWKDFFCDWRKIRFNEGVEPPSWLIGDLVLEADCAGIVFESVAHPGGKNLVLYTDQLPAHGSITVNDP
RGDLPKDQSSWHRPKS
MKIIAYRNLACYRLHTPKWAIAPMSGAGAATQGGRANRKGLEALYLSLEPATAVAEFQQGSPFLPPGLLVSYSLTLDRVI
DFTGGYQEDWPPIWKDFFCDWRKIRFNEGVEPPSWLIGDLVLEADCAGIVFESVAHPGGKNLVLYTDQLPAHGSITVNDP
RGDLPKDQSSWHRPKS
Download Length: 531 bp
Antitoxin
Download Length: 132 a.a. Molecular weight: 14986.05 Da Isoelectric Point: 5.6928
>AT274047 WP_252826666.1 NZ_CP119382:c796727-796332 [Pseudomonas kermanshahensis]
MASNAVLELHPTTFEGLMEALREVNRVMFSPERFLKVFSMDQQTFAARAHVHRNTVRNAPESEKIQAYIRDAVRVLRALT
DMGTEMTKAIFWFKNEPLSTFDYKTAEEVVSEGRTEQLIAFLQSWEAGAQG
MASNAVLELHPTTFEGLMEALREVNRVMFSPERFLKVFSMDQQTFAARAHVHRNTVRNAPESEKIQAYIRDAVRVLRALT
DMGTEMTKAIFWFKNEPLSTFDYKTAEEVVSEGRTEQLIAFLQSWEAGAQG
Download Length: 396 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|