Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2741298..2742886 Replicon chromosome
Accession NZ_CP119174
Organism Klebsiella pneumoniae strain X-CRHVKP-130

Toxin (Protein)


Gene name hipA Uniprot ID A0A0H3GN97
Locus tag PY995_RS13610 Protein ID WP_004199851.1
Coordinates 2741298..2742620 (-) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag PY995_RS13615 Protein ID WP_002904790.1
Coordinates 2742620..2742886 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PY995_RS13595 (PY995_13595) 2736363..2738864 + 2502 WP_004199853.1 fimbria/pilus outer membrane usher protein -
PY995_RS13600 (PY995_13600) 2738852..2739856 + 1005 WP_004199852.1 fimbrial protein -
PY995_RS13605 (PY995_13605) 2739989..2741281 + 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
PY995_RS13610 (PY995_13610) 2741298..2742620 - 1323 WP_004199851.1 type II toxin-antitoxin system HipA family toxin Toxin
PY995_RS13615 (PY995_13615) 2742620..2742886 - 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
PY995_RS13620 (PY995_13620) 2743152..2743478 - 327 WP_002904788.1 hydroxyisourate hydrolase -
PY995_RS13625 (PY995_13625) 2743475..2743975 - 501 WP_002904787.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
PY995_RS13630 (PY995_13630) 2743953..2745332 - 1380 WP_004199850.1 nucleobase:cation symporter-2 family protein -
PY995_RS13635 (PY995_13635) 2745678..2746832 + 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
PY995_RS13640 (PY995_13640) 2746813..2747736 - 924 WP_004199849.1 LysR family hpxDE operon transcriptional regulator HpxR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(16-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49128.44 Da        Isoelectric Point: 7.2487

>T273894 WP_004199851.1 NZ_CP119174:c2742620-2741298 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITSQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPLEQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT273894 WP_002904790.1 NZ_CP119174:c2742886-2742620 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GN97

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References