Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relE-dinJ/YafQ-DinJ |
Location | 16362..16896 | Replicon | plasmid pCFSAN126951_03 |
Accession | NZ_CP119162 | ||
Organism | Enterococcus faecalis strain GENOMIC22-006 |
Toxin (Protein)
Gene name | relE | Uniprot ID | R3JX52 |
Locus tag | P0D81_RS16770 | Protein ID | WP_002360769.1 |
Coordinates | 16621..16896 (+) | Length | 92 a.a. |
Antitoxin (Protein)
Gene name | dinJ | Uniprot ID | R3H6P0 |
Locus tag | P0D81_RS16765 | Protein ID | WP_002369771.1 |
Coordinates | 16362..16628 (+) | Length | 89 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
P0D81_RS16730 (12220) | 12220..13005 | + | 786 | WP_002360778.1 | replication-relaxation family protein | - |
P0D81_RS16735 (13011) | 13011..13499 | + | 489 | WP_002412099.1 | hypothetical protein | - |
P0D81_RS16740 (14091) | 14091..14357 | + | 267 | WP_010714123.1 | hypothetical protein | - |
P0D81_RS16745 (14390) | 14390..14890 | + | 501 | WP_002360775.1 | DnaJ domain-containing protein | - |
P0D81_RS16750 (14903) | 14903..15151 | + | 249 | WP_002360773.1 | DUF3850 domain-containing protein | - |
P0D81_RS16755 (15227) | 15227..15643 | + | 417 | WP_202464287.1 | single-stranded DNA-binding protein | - |
P0D81_RS16760 (15667) | 15667..16251 | + | 585 | WP_002383617.1 | thermonuclease family protein | - |
P0D81_RS16765 (16362) | 16362..16628 | + | 267 | WP_002369771.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
P0D81_RS16770 (16621) | 16621..16896 | + | 276 | WP_002360769.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
P0D81_RS16775 (17701) | 17701..17886 | + | 186 | WP_002368099.1 | hypothetical protein | - |
P0D81_RS16780 (17871) | 17871..18062 | + | 192 | WP_002383620.1 | DpnD/PcfM family protein | - |
P0D81_RS16785 (18294) | 18294..19073 | + | 780 | WP_002383621.1 | Cas9 inhibitor AcrIIA9 family protein | - |
P0D81_RS16790 (19073) | 19073..20332 | + | 1260 | WP_002360763.1 | PcfJ domain-containing protein | - |
P0D81_RS16795 (20981) | 20981..21709 | + | 729 | WP_002383622.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | erm(B) | - | 1..70159 | 70159 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M2AEA7 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M2AED7 |