Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RHH(antitoxin) |
Location | 9846..10402 | Replicon | plasmid pK533-strA |
Accession | NZ_CP118944 | ||
Organism | Aeromonas hydrophila strain K533 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | PY771_RS25115 | Protein ID | WP_182936448.1 |
Coordinates | 9846..10121 (-) | Length | 92 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | PY771_RS25120 | Protein ID | WP_182936447.1 |
Coordinates | 10121..10402 (-) | Length | 94 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PY771_RS25090 (PY771_25090) | 5886..6092 | - | 207 | Protein_5 | transposase | - |
PY771_RS25095 (PY771_25095) | 6079..6246 | + | 168 | Protein_6 | IS5/IS1182 family transposase | - |
PY771_RS25100 (PY771_25100) | 6492..7607 | + | 1116 | WP_275116042.1 | hypothetical protein | - |
PY771_RS25105 (PY771_25105) | 8023..8532 | - | 510 | WP_275116043.1 | hypothetical protein | - |
PY771_RS25110 (PY771_25110) | 9068..9796 | - | 729 | WP_182936449.1 | carbonic anhydrase | - |
PY771_RS25115 (PY771_25115) | 9846..10121 | - | 276 | WP_182936448.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
PY771_RS25120 (PY771_25120) | 10121..10402 | - | 282 | WP_182936447.1 | ribbon-helix-helix domain-containing protein | Antitoxin |
PY771_RS25125 (PY771_25125) | 10614..11171 | + | 558 | WP_048607679.1 | recombinase family protein | - |
PY771_RS25130 (PY771_25130) | 11174..14155 | + | 2982 | WP_275116044.1 | Tn3 family transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | aph(3'')-Ib / aph(6)-Id | - | 1..100830 | 100830 | |
- | inside | IScluster/Tn | aph(3'')-Ib / aph(6)-Id | - | 3303..45627 | 42324 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|
Antitoxin
Source | ID | Structure |
---|