Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | rlegTA/AbiEii-AbiEi |
| Location | 6742634..6744090 | Replicon | chromosome |
| Accession | NZ_CP118775 | ||
| Organism | Delftia tsuruhatensis strain ULwDis3 | ||
Toxin (Protein)
| Gene name | rlegT | Uniprot ID | A0A1D8J579 |
| Locus tag | PW274_RS31390 | Protein ID | WP_046239356.1 |
| Coordinates | 6743245..6744090 (+) | Length | 282 a.a. |
Antitoxin (Protein)
| Gene name | rlegA | Uniprot ID | - |
| Locus tag | PW274_RS31385 | Protein ID | WP_016447321.1 |
| Coordinates | 6742634..6743248 (+) | Length | 205 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PW274_RS31370 (PW274_31370) | 6738893..6740200 | + | 1308 | WP_017405691.1 | solute carrier family 23 protein | - |
| PW274_RS31375 (PW274_31375) | 6740408..6741922 | + | 1515 | WP_012202025.1 | acetyl-CoA hydrolase/transferase family protein | - |
| PW274_RS31380 (PW274_31380) | 6742053..6742526 | + | 474 | WP_012202024.1 | hotdog fold thioesterase | - |
| PW274_RS31385 (PW274_31385) | 6742634..6743248 | + | 615 | WP_016447321.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin |
| PW274_RS31390 (PW274_31390) | 6743245..6744090 | + | 846 | WP_046239356.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| PW274_RS31395 (PW274_31395) | 6744123..6744824 | - | 702 | WP_017405695.1 | ABC transporter ATP-binding protein | - |
| PW274_RS31400 (PW274_31400) | 6744829..6745587 | - | 759 | WP_126311553.1 | ABC transporter ATP-binding protein | - |
| PW274_RS31405 (PW274_31405) | 6745580..6746665 | - | 1086 | WP_126311552.1 | branched-chain amino acid ABC transporter permease | - |
| PW274_RS31410 (PW274_31410) | 6746669..6747541 | - | 873 | WP_013799989.1 | branched-chain amino acid ABC transporter permease | - |
| PW274_RS31415 (PW274_31415) | 6747592..6748755 | - | 1164 | WP_126311551.1 | ABC transporter substrate-binding protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 282 a.a. Molecular weight: 31079.80 Da Isoelectric Point: 8.1191
>T273438 WP_046239356.1 NZ_CP118775:6743245-6744090 [Delftia tsuruhatensis]
MSRDIAASIRARLKQCADARRQDFNLTLTHYGLERLLYRLSISPHADSYLLKGALLFAIWYEQPHRPTRDADLLGFGLDD
VDSAVSAFREICRIAVDDGIAFDAASVRGTAIRKEAGYGGVRIDLRATLDGARITLQVDIGFGDAVTPSPQAIRYPVLLD
GLPAPQLRSYPKYTVVAEKLHAICLLGMANTRMKDYFDLWVLMTEGTLDPAELRRAMKATFERRQLALPAGLPAGLSDGF
SSDAAKQAQWAAFLKKNRLEALELAPVVARLREEFQQCGIV
MSRDIAASIRARLKQCADARRQDFNLTLTHYGLERLLYRLSISPHADSYLLKGALLFAIWYEQPHRPTRDADLLGFGLDD
VDSAVSAFREICRIAVDDGIAFDAASVRGTAIRKEAGYGGVRIDLRATLDGARITLQVDIGFGDAVTPSPQAIRYPVLLD
GLPAPQLRSYPKYTVVAEKLHAICLLGMANTRMKDYFDLWVLMTEGTLDPAELRRAMKATFERRQLALPAGLPAGLSDGF
SSDAAKQAQWAAFLKKNRLEALELAPVVARLREEFQQCGIV
Download Length: 846 bp
Antitoxin
Download Length: 205 a.a. Molecular weight: 21967.59 Da Isoelectric Point: 9.9117
>AT273438 WP_016447321.1 NZ_CP118775:6742634-6743248 [Delftia tsuruhatensis]
MPAPGSALEQAVLALAEQRPLLRARDLAALGLPTMALSRLVAAGRLERVARGLYSLPGRPLSEHRSLAEVALRVPQGVVC
LLSALRVHGIGTQAPFEVWMAIPHHSPTPRIDQPALRAIRMSGAALSEGVETLQIDGVGVAVFNASKTVADCFKYRNKIG
LDVALEALRDGWAQRKLTADALWHYAAIDRVSNVMRPYLESIAA
MPAPGSALEQAVLALAEQRPLLRARDLAALGLPTMALSRLVAAGRLERVARGLYSLPGRPLSEHRSLAEVALRVPQGVVC
LLSALRVHGIGTQAPFEVWMAIPHHSPTPRIDQPALRAIRMSGAALSEGVETLQIDGVGVAVFNASKTVADCFKYRNKIG
LDVALEALRDGWAQRKLTADALWHYAAIDRVSNVMRPYLESIAA
Download Length: 615 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|