Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/PRK09907(toxin) |
Location | 55871..56442 | Replicon | plasmid pW5-2 |
Accession | NZ_CP118757 | ||
Organism | Enterococcus faecalis strain W5 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | A0A2Z2CGM4 |
Locus tag | PWA41_RS14565 | Protein ID | WP_002362432.1 |
Coordinates | 55871..56212 (-) | Length | 114 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | R3KHK9 |
Locus tag | PWA41_RS14570 | Protein ID | WP_002362431.1 |
Coordinates | 56212..56442 (-) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PWA41_RS14550 (PWA41_14545) | 52608..53210 | - | 603 | WP_002362434.1 | Fic family protein | - |
PWA41_RS14555 (PWA41_14550) | 53454..54632 | - | 1179 | WP_000997695.1 | IS256-like element ISEf1 family transposase | - |
PWA41_RS14560 (PWA41_14555) | 54821..55759 | - | 939 | WP_002362433.1 | hypothetical protein | - |
PWA41_RS14565 (PWA41_14560) | 55871..56212 | - | 342 | WP_002362432.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin |
PWA41_RS14570 (PWA41_14565) | 56212..56442 | - | 231 | WP_002362431.1 | hypothetical protein | Antitoxin |
PWA41_RS14575 (PWA41_14570) | 56646..57266 | + | 621 | WP_002367784.1 | recombinase family protein | - |
PWA41_RS14580 (PWA41_14575) | 57256..57570 | + | 315 | WP_002367785.1 | hypothetical protein | - |
PWA41_RS14585 (PWA41_14580) | 57564..57770 | + | 207 | WP_002367786.1 | hypothetical protein | - |
PWA41_RS14590 (PWA41_14585) | 57930..58124 | + | 195 | WP_002367787.1 | hypothetical protein | - |
PWA41_RS14595 (PWA41_14590) | 58136..58327 | + | 192 | WP_002367788.1 | hypothetical protein | - |
PWA41_RS14600 (PWA41_14595) | 58497..58712 | + | 216 | WP_002367791.1 | leucocin A/sakacin P family class II bacteriocin | - |
PWA41_RS14605 (PWA41_14600) | 58713..59054 | + | 342 | WP_002367792.1 | bacteriocin immunity protein | - |
PWA41_RS14610 (PWA41_14605) | 59470..59988 | + | 519 | WP_002367793.1 | hypothetical protein | - |
PWA41_RS14615 (PWA41_14610) | 59936..60151 | + | 216 | WP_002415356.1 | hypothetical protein | - |
PWA41_RS14620 (PWA41_14615) | 60243..60329 | + | 87 | WP_012881081.1 | type I toxin-antitoxin system Fst family toxin | - |
PWA41_RS14625 (PWA41_14620) | 60586..60882 | + | 297 | WP_002367795.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Conjugative plasmid | tet(L) / tet(M) / fexA / optrA / erm(A) / erm(B) / aph(3')-III / ant(6)-Ia / dfrG | - | 1..76420 | 76420 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 114 a.a. Molecular weight: 13244.44 Da Isoelectric Point: 8.0113
>T273418 WP_002362432.1 NZ_CP118757:c56212-55871 [Enterococcus faecalis]
MSDEKKYIPKKGDIVWIDFDPSAEKEIQKRRPGLVVSRYEFNRKTLFAVICPITSTIKNMPTRYTLPDEMETHGQVVISQ
LKSLDFAERKLSQIEHLPLKDMAKIDQIIEYIF
MSDEKKYIPKKGDIVWIDFDPSAEKEIQKRRPGLVVSRYEFNRKTLFAVICPITSTIKNMPTRYTLPDEMETHGQVVISQ
LKSLDFAERKLSQIEHLPLKDMAKIDQIIEYIF
Download Length: 342 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A2Z2CGM4 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | R3KHK9 |