Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE-RelB |
Location | 1541785..1542344 | Replicon | chromosome |
Accession | NZ_CP117988 | ||
Organism | Vibrio campbellii strain 20220413_1 |
Toxin (Protein)
Gene name | relE | Uniprot ID | A0A2I3C6F2 |
Locus tag | PUN50_RS07285 | Protein ID | WP_005377065.1 |
Coordinates | 1541785..1542063 (-) | Length | 93 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | PUN50_RS07290 | Protein ID | WP_051118409.1 |
Coordinates | 1542060..1542344 (-) | Length | 95 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PUN50_RS07215 (PUN50_07215) | 1536872..1536964 | + | 93 | WP_140391838.1 | DUF3265 domain-containing protein | - |
PUN50_RS07220 (PUN50_07220) | 1536997..1537773 | + | 777 | WP_274291111.1 | DUF4393 domain-containing protein | - |
PUN50_RS07225 (PUN50_07225) | 1537788..1537880 | + | 93 | WP_078534682.1 | DUF3265 domain-containing protein | - |
PUN50_RS07230 (PUN50_07230) | 1537934..1538239 | + | 306 | WP_274291112.1 | NIPSNAP family protein | - |
PUN50_RS07235 (PUN50_07235) | 1538388..1538714 | + | 327 | WP_274291113.1 | hypothetical protein | - |
PUN50_RS07240 (PUN50_07240) | 1538701..1538787 | + | 87 | Protein_1352 | DUF3265 domain-containing protein | - |
PUN50_RS07245 (PUN50_07245) | 1538861..1539220 | + | 360 | WP_047482898.1 | hypothetical protein | - |
PUN50_RS07250 (PUN50_07250) | 1539217..1539282 | + | 66 | Protein_1354 | DUF3265 domain-containing protein | - |
PUN50_RS07255 (PUN50_07255) | 1539372..1539713 | + | 342 | WP_182053875.1 | hypothetical protein | - |
PUN50_RS07260 (PUN50_07260) | 1539695..1539778 | + | 84 | Protein_1356 | DUF3265 domain-containing protein | - |
PUN50_RS07265 (PUN50_07265) | 1539944..1540147 | + | 204 | WP_274291114.1 | hypothetical protein | - |
PUN50_RS07270 (PUN50_07270) | 1540250..1540966 | + | 717 | WP_274291115.1 | hypothetical protein | - |
PUN50_RS07275 (PUN50_07275) | 1541116..1541643 | + | 528 | WP_043883630.1 | CbrC family protein | - |
PUN50_RS07280 (PUN50_07280) | 1541607..1541756 | + | 150 | WP_005433746.1 | DUF3265 domain-containing protein | - |
PUN50_RS07285 (PUN50_07285) | 1541785..1542063 | - | 279 | WP_005377065.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin |
PUN50_RS07290 (PUN50_07290) | 1542060..1542344 | - | 285 | WP_051118409.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
PUN50_RS07295 (PUN50_07295) | 1542530..1542850 | + | 321 | WP_050906161.1 | immunity protein Tsi6 family protein | - |
PUN50_RS07300 (PUN50_07300) | 1542876..1543844 | - | 969 | WP_274291116.1 | IS30-like element ISVa6 family transposase | - |
PUN50_RS07305 (PUN50_07305) | 1543925..1543996 | + | 72 | Protein_1365 | DUF3265 domain-containing protein | - |
PUN50_RS07310 (PUN50_07310) | 1544097..1545239 | + | 1143 | WP_274291117.1 | DUF4263 domain-containing protein | - |
PUN50_RS07315 (PUN50_07315) | 1545356..1545637 | + | 282 | WP_274291118.1 | hypothetical protein | - |
PUN50_RS07320 (PUN50_07320) | 1545675..1545764 | + | 90 | WP_140101462.1 | DUF3265 domain-containing protein | - |
PUN50_RS07325 (PUN50_07325) | 1545792..1546280 | + | 489 | WP_053441821.1 | GNAT family N-acetyltransferase | - |
PUN50_RS07330 (PUN50_07330) | 1546298..1546387 | + | 90 | WP_274291240.1 | DUF3265 domain-containing protein | - |
PUN50_RS07335 (PUN50_07335) | 1546416..1546715 | + | 300 | WP_038892926.1 | hypothetical protein | - |
PUN50_RS07340 (PUN50_07340) | 1546745..1546834 | + | 90 | WP_077345960.1 | DUF3265 domain-containing protein | - |
PUN50_RS07345 (PUN50_07345) | 1546872..1547327 | + | 456 | WP_274291119.1 | GNAT family N-acetyltransferase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | - | 1525174..1572433 | 47259 | |
- | flank | IS/Tn | - | - | 1542876..1543652 | 776 | |
- | inside | Integron | - | - | 1523973..1566365 | 42392 | |
- | inside | Genomic island | - | - | 1525662..1566365 | 40703 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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