Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yoeB-relB/YoeB-RelB
Location 1010904..1011420 Replicon chromosome
Accession NZ_CP117883
Organism Mucilaginibacter sp. KACC 22773

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag PQ469_RS04365 Protein ID WP_274211875.1
Coordinates 1011160..1011420 (+) Length 87 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag PQ469_RS04360 Protein ID WP_274211874.1
Coordinates 1010904..1011158 (+) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PQ469_RS04350 (PQ469_04350) 1006940..1008160 + 1221 WP_274211872.1 serpin family protein -
PQ469_RS04355 (PQ469_04355) 1008271..1010739 - 2469 WP_274211873.1 M1 family metallopeptidase -
PQ469_RS04360 (PQ469_04360) 1010904..1011158 + 255 WP_274211874.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
PQ469_RS04365 (PQ469_04365) 1011160..1011420 + 261 WP_274211875.1 Txe/YoeB family addiction module toxin Toxin
PQ469_RS04370 (PQ469_04370) 1011498..1012919 - 1422 WP_274211876.1 C45 family peptidase -
PQ469_RS04375 (PQ469_04375) 1013472..1014089 + 618 WP_090643368.1 50S ribosomal protein L3 -
PQ469_RS04380 (PQ469_04380) 1014091..1014723 + 633 WP_090643371.1 50S ribosomal protein L4 -
PQ469_RS04385 (PQ469_04385) 1014726..1015016 + 291 WP_090643376.1 50S ribosomal protein L23 -
PQ469_RS04390 (PQ469_04390) 1015025..1015852 + 828 WP_090643381.1 50S ribosomal protein L2 -
PQ469_RS04395 (PQ469_04395) 1015852..1016118 + 267 WP_076377419.1 30S ribosomal protein S19 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-71)


Sequences

Toxin        


Download         Length: 87 a.a.        Molecular weight: 10385.06 Da        Isoelectric Point: 9.5318

>T272456 WP_274211875.1 NZ_CP117883:1011160-1011420 [Mucilaginibacter sp. KACC 22773]
MELVWQTQGWDDYLHWQQADKKVMERINALIKECLRSPFKGIGKPEPLKGNFAGCWSRRITDEHRLIYKVKDGRLHILQC
RYHYQI

Download         Length: 261 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9637.86 Da        Isoelectric Point: 4.8552

>AT272456 WP_274211874.1 NZ_CP117883:1010904-1011158 [Mucilaginibacter sp. KACC 22773]
MEVLNYTEFRKNLARNLDKVNDDAEVVIVSRSKGKNVVVIGLDEYNAITETLHIVKSEANRKRLQDAIDEMDSGAFYQHK
LIED

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References