Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | VII | Classification (family/domain) | HepT-MntA/HepT(toxin) |
Location | 2338952..2339736 | Replicon | chromosome |
Accession | NZ_CP117812 | ||
Organism | Lentisphaera profundi strain SAORIC-696 |
Toxin (Protein)
Gene name | hepT | Uniprot ID | - |
Locus tag | PQO03_RS20620 | Protein ID | WP_274153068.1 |
Coordinates | 2339326..2339736 (+) | Length | 137 a.a. |
Antitoxin (Protein)
Gene name | mntA | Uniprot ID | - |
Locus tag | PQO03_RS20615 | Protein ID | WP_274153066.1 |
Coordinates | 2338952..2339329 (+) | Length | 126 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PQO03_RS20590 (PQO03_20590) | 2334088..2335041 | + | 954 | WP_274153060.1 | SDR family oxidoreductase | - |
PQO03_RS20595 (PQO03_20595) | 2335193..2335516 | + | 324 | Protein_1770 | four helix bundle protein | - |
PQO03_RS20600 (PQO03_20600) | 2335914..2337287 | + | 1374 | WP_274153061.1 | nucleotide sugar dehydrogenase | - |
PQO03_RS20605 (PQO03_20605) | 2337450..2337797 | + | 348 | WP_274153062.1 | four helix bundle protein | - |
PQO03_RS20610 (PQO03_20610) | 2337890..2338651 | + | 762 | WP_274153064.1 | glycosyltransferase family 2 protein | - |
PQO03_RS20615 (PQO03_20615) | 2338952..2339329 | + | 378 | WP_274153066.1 | nucleotidyltransferase domain-containing protein | Antitoxin |
PQO03_RS20620 (PQO03_20620) | 2339326..2339736 | + | 411 | WP_274153068.1 | DUF86 domain-containing protein | Toxin |
PQO03_RS20625 (PQO03_20625) | 2340197..2342593 | - | 2397 | WP_274153070.1 | N,N'-diacetylchitobiose phosphorylase | - |
PQO03_RS20630 (PQO03_20630) | 2343176..2344444 | + | 1269 | WP_274153072.1 | FtsX-like permease family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 137 a.a. Molecular weight: 15597.90 Da Isoelectric Point: 5.6039
>T272283 WP_274153068.1 NZ_CP117812:2339326-2339736 [Lentisphaera profundi]
MIDDVKFNKLNTIERCLKRIDEEYQNSHERYLSSFTIQDSIILNLQRACEASIDLAMHLIAQGKLGIPQTSRDAFKILEE
KQMIDSNLSKELQAMVGFRNIAVHDYQDLQGPIVLAILDKHLSSFTDFIQKINSLS
MIDDVKFNKLNTIERCLKRIDEEYQNSHERYLSSFTIQDSIILNLQRACEASIDLAMHLIAQGKLGIPQTSRDAFKILEE
KQMIDSNLSKELQAMVGFRNIAVHDYQDLQGPIVLAILDKHLSSFTDFIQKINSLS
Download Length: 411 bp
Antitoxin
Download Length: 126 a.a. Molecular weight: 14138.97 Da Isoelectric Point: 5.1028
>AT272283 WP_274153066.1 NZ_CP117812:2338952-2339329 [Lentisphaera profundi]
MITINTEHIIKSLQELHPEGLILFGSHSKGCARKDSDIDIAFLSSKSFSEYDVFCKAEALASELNCDINLINLQNASTVF
AYNILTSGTILQISNDYHWNRFSYLTYSLYAKLNEERHEILTAVS
MITINTEHIIKSLQELHPEGLILFGSHSKGCARKDSDIDIAFLSSKSFSEYDVFCKAEALASELNCDINLINLQNASTVF
AYNILTSGTILQISNDYHWNRFSYLTYSLYAKLNEERHEILTAVS
Download Length: 378 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|
Antitoxin
Source | ID | Structure |
---|