Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 448030..448683 Replicon chromosome
Accession NZ_CP117728
Organism Acinetobacter baumannii strain 2022CK-00783

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag PTC89_RS02180 Protein ID WP_000607077.1
Coordinates 448294..448683 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag PTC89_RS02175 Protein ID WP_001288210.1
Coordinates 448030..448287 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PTC89_RS02155 (PTC89_02155) 443546..444553 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
PTC89_RS02160 (PTC89_02160) 444572..444949 + 378 WP_001216380.1 50S ribosomal protein L17 -
PTC89_RS02165 (PTC89_02165) 445131..446621 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
PTC89_RS02170 (PTC89_02170) 446670..447842 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
PTC89_RS02175 (PTC89_02175) 448030..448287 + 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
PTC89_RS02180 (PTC89_02180) 448294..448683 + 390 WP_000607077.1 membrane protein Toxin
PTC89_RS02185 (PTC89_02185) 449453..450538 + 1086 WP_000049106.1 hypothetical protein -
PTC89_RS02190 (PTC89_02190) 450616..451182 + 567 WP_000651538.1 rhombosortase -
PTC89_RS02195 (PTC89_02195) 451370..453565 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T272178 WP_000607077.1 NZ_CP117728:448294-448683 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT272178 WP_001288210.1 NZ_CP117728:448030-448287 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References