Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relB-yefM/YoeB-RelB |
| Location | 1603648..1604162 | Replicon | chromosome |
| Accession | NZ_CP116231 | ||
| Organism | Fusobacterium nucleatum strain JD-Fn1 | ||
Toxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | PGW91_RS07465 | Protein ID | WP_098978559.1 |
| Coordinates | 1603648..1603905 (-) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | U7TQU0 |
| Locus tag | PGW91_RS07470 | Protein ID | WP_005919458.1 |
| Coordinates | 1603905..1604162 (-) | Length | 86 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGW91_RS07445 (PGW91_07445) | 1599806..1600438 | - | 633 | WP_271332831.1 | hypothetical protein | - |
| PGW91_RS07450 (PGW91_07450) | 1600730..1601587 | - | 858 | WP_271332832.1 | toxin-antitoxin system YwqK family antitoxin | - |
| PGW91_RS07455 (PGW91_07455) | 1601709..1602446 | - | 738 | WP_271332833.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| PGW91_RS07460 (PGW91_07460) | 1602455..1603531 | - | 1077 | WP_271332834.1 | DHH family phosphoesterase | - |
| PGW91_RS07465 (PGW91_07465) | 1603648..1603905 | - | 258 | WP_098978559.1 | Txe/YoeB family addiction module toxin | Toxin |
| PGW91_RS07470 (PGW91_07470) | 1603905..1604162 | - | 258 | WP_005919458.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
| PGW91_RS07475 (PGW91_07475) | 1604282..1604428 | - | 147 | Protein_1468 | glycerophosphodiester phosphodiesterase | - |
| PGW91_RS07480 (PGW91_07480) | 1604430..1605428 | - | 999 | WP_271332835.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| PGW91_RS07485 (PGW91_07485) | 1605454..1605927 | - | 474 | WP_005894577.1 | OmpH family outer membrane protein | - |
| PGW91_RS07490 (PGW91_07490) | 1605967..1608060 | - | 2094 | WP_271332836.1 | outer membrane protein assembly factor | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|