Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 427255..427605 Replicon chromosome
Accession NZ_CP115911
Organism Xanthomonas oryzae pv. oryzae strain NE-8

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag PEV90_RS02000 Protein ID WP_011257368.1
Coordinates 427471..427605 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag PEV90_RS01995 Protein ID WP_011407410.1
Coordinates 427255..427407 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PEV90_RS01970 (PEV90_01970) 423526..424209 - 684 WP_011257363.1 dTMP kinase -
PEV90_RS01975 (PEV90_01975) 424689..425231 - 543 Protein_377 GTPase -
PEV90_RS01980 (PEV90_01980) 425228..425692 - 465 Protein_378 hypothetical protein -
PEV90_RS01985 (PEV90_01985) 425684..425902 - 219 Protein_379 hypothetical protein -
PEV90_RS01990 (PEV90_01990) 426224..427147 + 924 WP_011407409.1 arginase -
PEV90_RS01995 (PEV90_01995) 427255..427407 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
PEV90_RS02000 (PEV90_02000) 427471..427605 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
PEV90_RS02005 (PEV90_02005) 427849..428058 + 210 WP_011407411.1 CsbD family protein -
PEV90_RS02010 (PEV90_02010) 428227..429516 + 1290 WP_011257370.1 tryptophan--tRNA ligase -
PEV90_RS02015 (PEV90_02015) 429647..430591 + 945 WP_041181936.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T267485 WP_011257368.1 NZ_CP115911:427471-427605 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT267485 WP_011407410.1 NZ_CP115911:427255-427407 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References