Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsaAT/- |
Location | 829723..830200 | Replicon | chromosome |
Accession | NZ_CP115887 | ||
Organism | Staphylococcus aureus strain C308 |
Toxin (Protein)
Gene name | TsaT | Uniprot ID | T1Y7S2 |
Locus tag | PCM89_RS03855 | Protein ID | WP_000052076.1 |
Coordinates | 829723..829911 (-) | Length | 63 a.a. |
Antitoxin (Protein)
Gene name | TsaA | Uniprot ID | T1Y6P8 |
Locus tag | PCM89_RS03860 | Protein ID | WP_001059690.1 |
Coordinates | 829940..830200 (-) | Length | 87 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PCM89_RS03825 (825713) | 825713..826234 | + | 522 | WP_000824488.1 | hypothetical protein | - |
PCM89_RS03830 (826575) | 826575..827261 | + | 687 | WP_001670297.1 | thermonuclease family protein | - |
PCM89_RS03835 (827618) | 827618..827818 | + | 201 | WP_001059082.1 | cold-shock protein | - |
PCM89_RS03840 (828314) | 828314..828532 | - | 219 | WP_000005876.1 | hypothetical protein | - |
PCM89_RS03845 (828594) | 828594..828878 | - | 285 | WP_001004395.1 | hypothetical protein | - |
PCM89_RS03850 (828966) | 828966..829535 | - | 570 | WP_001106646.1 | lipoprotein N-acylation protein LnsA | - |
PCM89_RS03855 (829723) | 829723..829911 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin |
PCM89_RS03860 (829940) | 829940..830200 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin |
PCM89_RS03865 (830540) | 830540..830743 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
PCM89_RS03870 (830740) | 830740..830976 | - | 237 | WP_000368687.1 | hypothetical protein | - |
PCM89_RS03875 (831201) | 831201..831782 | + | 582 | WP_001140696.1 | histidine phosphatase family protein | - |
PCM89_RS03880 (831855) | 831855..832472 | - | 618 | WP_000255559.1 | LysE/ArgO family amino acid transporter | - |
PCM89_RS03885 (832625) | 832625..833119 | - | 495 | WP_000590539.1 | GNAT family N-acetyltransferase | - |
PCM89_RS03890 (833518) | 833518..833940 | - | 423 | WP_000974455.1 | organic hydroperoxide resistance protein | - |
PCM89_RS03895 (834088) | 834088..834804 | + | 717 | WP_000150015.1 | type I 3-dehydroquinate dehydratase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0E0VP18 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0E0VN56 |