Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE(toxin)
Location 3033332..3033854 Replicon chromosome
Accession NZ_CP115784
Organism Paracoccus aerodenitrificans strain SCSIO 75817

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag PAE61_RS16200 Protein ID WP_271113373.1
Coordinates 3033332..3033616 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag PAE61_RS16205 Protein ID WP_271113374.1
Coordinates 3033606..3033854 (-) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PAE61_RS16175 (PAE61_16175) 3029517..3030476 - 960 WP_271113369.1 IS5 family transposase -
PAE61_RS16180 (PAE61_16180) 3030695..3031482 + 788 WP_271112960.1 IS5 family transposase -
PAE61_RS16185 (PAE61_16185) 3031779..3032054 + 276 WP_271113370.1 type II toxin-antitoxin system RelE/ParE family toxin -
PAE61_RS16190 (PAE61_16190) 3032064..3032363 + 300 WP_271113371.1 HigA family addiction module antitoxin -
PAE61_RS16195 (PAE61_16195) 3032409..3033323 + 915 WP_271113372.1 FRG domain-containing protein -
PAE61_RS16200 (PAE61_16200) 3033332..3033616 - 285 WP_271113373.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
PAE61_RS16205 (PAE61_16205) 3033606..3033854 - 249 WP_271113374.1 plasmid stabilization protein Antitoxin
PAE61_RS16210 (PAE61_16210) 3034059..3034280 + 222 WP_271113375.1 hypothetical protein -
PAE61_RS16215 (PAE61_16215) 3034283..3035242 - 960 WP_271113369.1 IS5 family transposase -
PAE61_RS16220 (PAE61_16220) 3035480..3035878 + 399 WP_271113376.1 MarR family transcriptional regulator -
PAE61_RS16225 (PAE61_16225) 3035956..3037497 + 1542 WP_271113377.1 MFS transporter -
PAE61_RS16230 (PAE61_16230) 3037497..3038582 + 1086 WP_271113378.1 HlyD family secretion protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 10868.60 Da        Isoelectric Point: 10.8690

>T267384 WP_271113373.1 NZ_CP115784:c3033616-3033332 [Paracoccus aerodenitrificans]
MSYELRFRKEAKKEWDSLGATIRTQFKKKLAERLESPHVPASKLHGSTNRYKIKLRSSGYRLVYEVRDAEIVVSVIAVGK
RERSAVYKAAAKRE

Download         Length: 285 bp

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 8637.70 Da        Isoelectric Point: 3.9169

>AT267384 WP_271113374.1 NZ_CP115784:c3033854-3033606 [Paracoccus aerodenitrificans]
MANVIHAGVTASVTEFKRNPMGTMAAGNGAAVAVLNRNQPAFYCVPADEYEAMLNLIEDAELNAIADARSDSPEIAVSLD
EL

Download         Length: 249 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References