Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 2449364..2450855 Replicon chromosome
Accession NZ_CP115713
Organism Rhodopseudomonas palustris strain k7

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag OOZ54_RS11285 Protein ID WP_271102663.1
Coordinates 2449977..2450855 (+) Length 293 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag OOZ54_RS11280 Protein ID WP_271102866.1
Coordinates 2449364..2449984 (+) Length 207 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OOZ54_RS11260 (OOZ54_11260) 2444941..2445624 - 684 WP_271102659.1 DNA-binding protein -
OOZ54_RS11265 (OOZ54_11265) 2445599..2446789 - 1191 WP_271102660.1 XRE family transcriptional regulator -
OOZ54_RS11270 (OOZ54_11270) 2446773..2448131 - 1359 WP_271102661.1 7-cyano-7-deazaguanine synthase -
OOZ54_RS11275 (OOZ54_11275) 2448155..2448730 - 576 WP_271102662.1 hypothetical protein -
OOZ54_RS11280 (OOZ54_11280) 2449364..2449984 + 621 WP_271102866.1 AbiEi antitoxin N-terminal domain-containing protein Antitoxin
OOZ54_RS11285 (OOZ54_11285) 2449977..2450855 + 879 WP_271102663.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
OOZ54_RS11290 (OOZ54_11290) 2451032..2452228 - 1197 WP_271102664.1 sodium/glutamate symporter -
OOZ54_RS11295 (OOZ54_11295) 2452406..2452834 - 429 WP_271102665.1 type II toxin-antitoxin system VapC family toxin -
OOZ54_RS11300 (OOZ54_11300) 2452834..2453133 - 300 WP_271102666.1 hypothetical protein -
OOZ54_RS11305 (OOZ54_11305) 2453326..2454306 - 981 WP_271102667.1 YafY family protein -
OOZ54_RS11310 (OOZ54_11310) 2454390..2455034 + 645 WP_271102668.1 glutathione S-transferase family protein -
OOZ54_RS11315 (OOZ54_11315) 2455260..2455703 + 444 WP_271102669.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 2444941..2453133 8192


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(38-265)

Antitoxin

Transcriptional regulator AbiEi antitoxin, N-terminal domain

(10-92)


Sequences

Toxin        


Download         Length: 293 a.a.        Molecular weight: 32345.03 Da        Isoelectric Point: 4.6117

>T267337 WP_271102663.1 NZ_CP115713:2449977-2450855 [Rhodopseudomonas palustris]
MAKAPTNVAKSVKDRLLNIARKEGRAFDVLLVRFALERLLYRLSISAHSDRFVLKGGMLVTVWVADDNRVTRDADFLGHG
DADPDRLIADFGEIMAIESDDGLAFDIDALTAMVIREEMEYGGVRLKTAAYLERTHIPVTIDIGFGDAMADATQRLDYPT
LLDLPAPQVRCYPPATVIAEKFQAMVELGVLNGRMKDYYDLWAIPRAIDISADDLDAAISATFERRRTPIPKVRPPGLSA
EMFGDEGKQRQWRAYAASLELDAISLESIIEAVWELVGPSCARIVARSDSEA

Download         Length: 879 bp

Antitoxin


Download         Length: 207 a.a.        Molecular weight: 22690.34 Da        Isoelectric Point: 10.6638

>AT267337 WP_271102866.1 NZ_CP115713:2449364-2449984 [Rhodopseudomonas palustris]
MRATRDSQKAKLISLLETRSMMRAQDLREAGISAQTIARAVEAGEIDRISRGVYQKRGVEVEENQILAEALMRAPKGVIA
LVSALAFHGLTDQMPRRVWMAIGTSDWAPVQSYPPLRIVRFTQPYLRQGIEHHVIAGLDVPIYSIPKTLADLFRNPKLVD
RSVAVEGLRAALQQRKATPSAIAHAAKAGGAWKVMQPYLEALTSNG

Download         Length: 621 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References