Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3422223..3422876 Replicon chromosome
Accession NZ_CP115637
Organism Acinetobacter baumannii strain 2022CK-00211

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag PF557_RS16335 Protein ID WP_000607070.1
Coordinates 3422223..3422612 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag PF557_RS16340 Protein ID WP_001288210.1
Coordinates 3422619..3422876 (-) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PF557_RS16320 (PF557_16320) 3417341..3419536 - 2196 WP_001158905.1 TRAP transporter large permease subunit -
PF557_RS16325 (PF557_16325) 3419724..3420290 - 567 WP_000651536.1 rhombosortase -
PF557_RS16330 (PF557_16330) 3420368..3421453 - 1086 WP_000049107.1 hypothetical protein -
PF557_RS16335 (PF557_16335) 3422223..3422612 - 390 WP_000607070.1 hypothetical protein Toxin
PF557_RS16340 (PF557_16340) 3422619..3422876 - 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
PF557_RS16345 (PF557_16345) 3423064..3424236 + 1173 WP_001190546.1 acyl-CoA dehydrogenase family protein -
PF557_RS16350 (PF557_16350) 3424286..3425776 - 1491 WP_000415133.1 NAD(P)/FAD-dependent oxidoreductase -
PF557_RS16355 (PF557_16355) 3425957..3426334 - 378 WP_001216380.1 50S ribosomal protein L17 -
PF557_RS16360 (PF557_16360) 3426353..3427360 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15708.02 Da        Isoelectric Point: 10.3599

>T267203 WP_000607070.1 NZ_CP115637:c3422612-3422223 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAILFYQLMPLLWWLVVISLLFISFIFFLKRPQLAKIAYLDKKLWSLAYHSQNTI
SRVKILKIIDYQIFIVIYFEDHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT267203 WP_001288210.1 NZ_CP115637:c3422876-3422619 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References