Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PRK09907-MazE
Location 966261..966670 Replicon chromosome
Accession NZ_CP115484
Organism Paenibacillus sp. SYP-B4298

Toxin (Protein)


Gene name mazF Uniprot ID -
Locus tag PDL12_RS03925 Protein ID WP_270169491.1
Coordinates 966566..966670 (+) Length 35 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID -
Locus tag PDL12_RS03920 Protein ID WP_270169489.1
Coordinates 966261..966491 (+) Length 77 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PDL12_RS03910 962006..962482 + 477 WP_270169485.1 hypothetical protein -
PDL12_RS03915 962771..964591 + 1821 WP_270169487.1 S8 family serine peptidase -
PDL12_RS03920 966261..966491 + 231 WP_270169489.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin
PDL12_RS03925 966566..966670 + 105 WP_270169491.1 hypothetical protein Toxin
PDL12_RS03930 968851..969642 + 792 WP_270169492.1 ABC-2 family transporter protein -
PDL12_RS03935 969645..970445 + 801 WP_270169494.1 ABC-2 family transporter protein -
PDL12_RS03940 970458..971435 + 978 WP_270169496.1 ATP-binding cassette domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

SpoVT-AbrB domain

(5-47)


Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3615.31 Da        Isoelectric Point: 9.0864

>T267169 WP_270169491.1 NZ_CP115484:966566-966670 [Paenibacillus sp. SYP-B4298]
MVVSPASYNGKVGLSLLCHVTSKQKGYPLEVVLP

Download         Length: 105 bp

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8434.59 Da        Isoelectric Point: 4.7277

>AT267169 WP_270169489.1 NZ_CP115484:966261-966491 [Paenibacillus sp. SYP-B4298]
MFQVQKWGNSLGIRIPKSLAMKVGIEEGTEVDLHIEDGHLLIKPKSATLDELLSQVTSDNVHTEIPTGDPQGREVW

Download         Length: 231 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References