Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | ataRT/DUF1778(antitoxin) |
| Location | 1792081..1792844 | Replicon | chromosome |
| Accession | NZ_CP115188 | ||
| Organism | Vibrio furnissii strain MT14 | ||
Toxin (Protein)
| Gene name | ataT | Uniprot ID | A0A366A926 |
| Locus tag | O8413_RS08310 | Protein ID | WP_045595200.1 |
| Coordinates | 1792338..1792844 (+) | Length | 169 a.a. |
Antitoxin (Protein)
| Gene name | ataR | Uniprot ID | - |
| Locus tag | O8413_RS08305 | Protein ID | WP_000212004.1 |
| Coordinates | 1792081..1792347 (+) | Length | 89 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O8413_RS08285 (O8413_08285) | 1787785..1788297 | - | 513 | WP_002040537.1 | S26 family signal peptidase | - |
| O8413_RS08290 (O8413_08290) | 1788281..1788628 | - | 348 | WP_001044649.1 | hypothetical protein | - |
| O8413_RS08295 (O8413_08295) | 1788621..1791020 | - | 2400 | WP_283512416.1 | type IV secretion system protein TraC | - |
| O8413_RS08300 (O8413_08300) | 1791020..1791712 | - | 693 | WP_001228926.1 | DsbC family protein | - |
| O8413_RS08305 (O8413_08305) | 1792081..1792347 | + | 267 | WP_000212004.1 | DUF1778 domain-containing protein | Antitoxin |
| O8413_RS08310 (O8413_08310) | 1792338..1792844 | + | 507 | WP_045595200.1 | GNAT family N-acetyltransferase | Toxin |
| O8413_RS08315 (O8413_08315) | 1792885..1793271 | - | 387 | WP_283512417.1 | TraA family conjugative transfer protein | - |
| O8413_RS08320 (O8413_08320) | 1793268..1793840 | - | 573 | WP_165387534.1 | type IV conjugative transfer system lipoprotein TraV | - |
| O8413_RS08325 (O8413_08325) | 1793915..1795204 | - | 1290 | WP_283512418.1 | TraB/VirB10 family protein | - |
| O8413_RS08330 (O8413_08330) | 1795207..1796103 | - | 897 | WP_002040533.1 | type-F conjugative transfer system secretin TraK | - |
| O8413_RS08335 (O8413_08335) | 1796087..1796713 | - | 627 | WP_000667169.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| O8413_RS08340 (O8413_08340) | 1796710..1796991 | - | 282 | WP_000433889.1 | type IV conjugative transfer system protein TraL | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Integrative and Conjugative Element | sul2 / aph(3'')-Ib / aph(6)-Id / tet(A) / floR | - | 1713726..1846175 | 132449 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 169 a.a. Molecular weight: 18277.06 Da Isoelectric Point: 7.2134
>T267080 WP_045595200.1 NZ_CP115188:1792338-1792844 [Vibrio furnissii]
MGISAPTLLTADHEINAFQCGIEELDTWLRKQALKSQKRGTARVYVVNDTEVHQVIGYYAIAMGSVSREQAFSSLRRNSP
DPIPMVILARLGVDNAYQGQGIAAGLLKDCIIRSVQAMNAVGGAGILVHAIDGSAQTFYKKFGFKESTFDPLVLMARICD
IEKSLSID
MGISAPTLLTADHEINAFQCGIEELDTWLRKQALKSQKRGTARVYVVNDTEVHQVIGYYAIAMGSVSREQAFSSLRRNSP
DPIPMVILARLGVDNAYQGQGIAAGLLKDCIIRSVQAMNAVGGAGILVHAIDGSAQTFYKKFGFKESTFDPLVLMARICD
IEKSLSID
Download Length: 507 bp
>T267080 NZ_CP115188:1792338-1792844 [Vibrio furnissii]
TTGGGAATAAGTGCACCAACCCTACTCACTGCTGATCACGAGATTAACGCCTTTCAATGTGGCATTGAAGAGCTCGATAC
TTGGTTAAGAAAGCAGGCGTTAAAGAGTCAAAAGCGGGGAACCGCGAGAGTGTATGTGGTCAATGACACTGAAGTCCATC
AAGTGATTGGGTACTATGCCATTGCCATGGGATCAGTTTCCAGAGAGCAAGCTTTCAGTTCATTAAGAAGAAATAGTCCA
GATCCCATTCCCATGGTGATTCTAGCCAGGCTTGGAGTAGATAACGCCTATCAAGGTCAAGGCATTGCGGCAGGTCTTTT
AAAAGATTGTATCATTCGCTCAGTACAAGCAATGAACGCCGTCGGTGGAGCAGGAATCTTAGTCCATGCTATTGATGGTA
GTGCGCAAACGTTCTACAAGAAATTTGGCTTCAAAGAATCGACGTTTGATCCTTTAGTACTCATGGCAAGGATCTGCGAT
ATCGAAAAATCATTGTCGATAGACTGA
TTGGGAATAAGTGCACCAACCCTACTCACTGCTGATCACGAGATTAACGCCTTTCAATGTGGCATTGAAGAGCTCGATAC
TTGGTTAAGAAAGCAGGCGTTAAAGAGTCAAAAGCGGGGAACCGCGAGAGTGTATGTGGTCAATGACACTGAAGTCCATC
AAGTGATTGGGTACTATGCCATTGCCATGGGATCAGTTTCCAGAGAGCAAGCTTTCAGTTCATTAAGAAGAAATAGTCCA
GATCCCATTCCCATGGTGATTCTAGCCAGGCTTGGAGTAGATAACGCCTATCAAGGTCAAGGCATTGCGGCAGGTCTTTT
AAAAGATTGTATCATTCGCTCAGTACAAGCAATGAACGCCGTCGGTGGAGCAGGAATCTTAGTCCATGCTATTGATGGTA
GTGCGCAAACGTTCTACAAGAAATTTGGCTTCAAAGAATCGACGTTTGATCCTTTAGTACTCATGGCAAGGATCTGCGAT
ATCGAAAAATCATTGTCGATAGACTGA
Antitoxin
Download Length: 89 a.a. Molecular weight: 9956.48 Da Isoelectric Point: 5.8580
>AT267080 WP_000212004.1 NZ_CP115188:1792081-1792347 [Vibrio furnissii]
MATKTAPINMRVLPSVRDIIDAAASLKKVDRTVFIQQAALNEAHSILAEQRDFVLEAKAFEAFDNELRAEPQTLEGMKDL
FKRKAPWE
MATKTAPINMRVLPSVRDIIDAAASLKKVDRTVFIQQAALNEAHSILAEQRDFVLEAKAFEAFDNELRAEPQTLEGMKDL
FKRKAPWE
Download Length: 267 bp
>AT267080 NZ_CP115188:1792081-1792347 [Vibrio furnissii]
ATGGCTACAAAGACAGCCCCAATCAACATGCGAGTACTGCCATCGGTAAGAGACATCATCGATGCCGCAGCAAGTTTAAA
AAAAGTTGATAGAACCGTGTTCATTCAGCAAGCAGCGCTCAATGAAGCGCATAGTATACTGGCAGAACAGCGGGATTTTG
TTCTAGAAGCAAAGGCTTTTGAAGCGTTTGATAACGAACTTCGTGCAGAGCCACAGACTCTTGAAGGTATGAAAGATCTG
TTTAAAAGGAAAGCGCCTTGGGAATAA
ATGGCTACAAAGACAGCCCCAATCAACATGCGAGTACTGCCATCGGTAAGAGACATCATCGATGCCGCAGCAAGTTTAAA
AAAAGTTGATAGAACCGTGTTCATTCAGCAAGCAGCGCTCAATGAAGCGCATAGTATACTGGCAGAACAGCGGGATTTTG
TTCTAGAAGCAAAGGCTTTTGAAGCGTTTGATAACGAACTTCGTGCAGAGCCACAGACTCTTGAAGGTATGAAAGATCTG
TTTAAAAGGAAAGCGCCTTGGGAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|