Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelB(antitoxin)
Location 4226414..4226819 Replicon chromosome
Accession NZ_CP114886
Organism Endozoicomonas sp. GU-1 strain Ap1-3

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag O2T12_RS17465 Protein ID WP_269674943.1
Coordinates 4226685..4226819 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag O2T12_RS17460 Protein ID WP_269674942.1
Coordinates 4226414..4226692 (+) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O2T12_RS17435 (O2T12_17435) 4222652..4223419 + 768 WP_269674938.1 efflux RND transporter periplasmic adaptor subunit -
O2T12_RS17440 (O2T12_17440) 4223495..4224322 + 828 WP_269674939.1 hypothetical protein -
O2T12_RS17445 (O2T12_17445) 4224384..4225079 - 696 WP_269676362.1 aspartate/glutamate racemase family protein -
O2T12_RS17450 (O2T12_17450) 4225374..4225550 - 177 WP_269674940.1 transcriptional regulator -
O2T12_RS17455 (O2T12_17455) 4225652..4226191 + 540 WP_269674941.1 DUF6155 family protein -
O2T12_RS17460 (O2T12_17460) 4226414..4226692 + 279 WP_269674942.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
O2T12_RS17465 (O2T12_17465) 4226685..4226819 + 135 WP_269674943.1 hypothetical protein Toxin
O2T12_RS17470 (O2T12_17470) 4226940..4227164 + 225 WP_269674944.1 type II toxin-antitoxin system YafQ family toxin -
O2T12_RS17520 (O2T12_17520) 4228849..4229820 + 972 WP_269674945.1 recombination-associated protein RdgC -
O2T12_RS17525 (O2T12_17525) 4229946..4230863 - 918 WP_269674946.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-85)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 5026.83 Da        Isoelectric Point: 9.7833

>T266883 WP_269674943.1 NZ_CP114886:4226685-4226819 [Endozoicomonas sp. GU-1]
MYSLEYSNQFKKDFKKITRLAIADIITVGHVIGTLQQAQTLDAR

Download         Length: 135 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 9813.23 Da        Isoelectric Point: 6.7156

>AT266883 WP_269674942.1 NZ_CP114886:4226414-4226692 [Endozoicomonas sp. GU-1]
MKQEMLSARIDHDTKAAFTNICEAVGLSTSQAIKLFAKAVINHGGIPFEVRVQQPNKTSVAAMKELDEGKGHSAVSVSAL
MNELTDGKVSDV

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References