Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelB(antitoxin)
Location 1675742..1676147 Replicon chromosome
Accession NZ_CP114771
Organism Endozoicomonas sp. GU-1 strain Ap1-2

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag O3276_RS06690 Protein ID WP_269674943.1
Coordinates 1676013..1676147 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag O3276_RS06685 Protein ID WP_269674942.1
Coordinates 1675742..1676020 (+) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O3276_RS06660 (O3276_06660) 1671979..1672746 + 768 WP_269674938.1 efflux RND transporter periplasmic adaptor subunit -
O3276_RS06665 (O3276_06665) 1672822..1673649 + 828 WP_269674939.1 hypothetical protein -
O3276_RS06670 (O3276_06670) 1673711..1674407 - 697 Protein_1300 aspartate/glutamate racemase family protein -
O3276_RS06675 (O3276_06675) 1674702..1674878 - 177 WP_269674940.1 transcriptional regulator -
O3276_RS06680 (O3276_06680) 1674980..1675519 + 540 WP_269674941.1 DUF6155 family protein -
O3276_RS06685 (O3276_06685) 1675742..1676020 + 279 WP_269674942.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
O3276_RS06690 (O3276_06690) 1676013..1676147 + 135 WP_269674943.1 hypothetical protein Toxin
O3276_RS06695 (O3276_06695) 1676268..1676492 + 225 WP_269674944.1 type II toxin-antitoxin system YafQ family toxin -
O3276_RS06745 (O3276_06745) 1678177..1679148 + 972 WP_269674945.1 recombination-associated protein RdgC -
O3276_RS06750 (O3276_06750) 1679274..1680191 - 918 WP_269674946.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-85)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 5026.83 Da        Isoelectric Point: 9.7833

>T266809 WP_269674943.1 NZ_CP114771:1676013-1676147 [Endozoicomonas sp. GU-1]
MYSLEYSNQFKKDFKKITRLAIADIITVGHVIGTLQQAQTLDAR

Download         Length: 135 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 9813.23 Da        Isoelectric Point: 6.7156

>AT266809 WP_269674942.1 NZ_CP114771:1675742-1676020 [Endozoicomonas sp. GU-1]
MKQEMLSARIDHDTKAAFTNICEAVGLSTSQAIKLFAKAVINHGGIPFEVRVQQPNKTSVAAMKELDEGKGHSAVSVSAL
MNELTDGKVSDV

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References