266785

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 429319..429669 Replicon chromosome
Accession NZ_CP114600
Organism Xanthomonas oryzae pv. oryzae strain LA20

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag O5966_RS02020 Protein ID WP_011257368.1
Coordinates 429535..429669 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag O5966_RS02015 Protein ID WP_011407410.1
Coordinates 429319..429471 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O5966_RS01990 (O5966_01990) 425590..426273 - 684 WP_011257363.1 dTMP kinase -
O5966_RS01995 (O5966_01995) 426753..427295 - 543 Protein_382 GTPase -
O5966_RS02000 (O5966_02000) 427292..427756 - 465 Protein_383 hypothetical protein -
O5966_RS02005 (O5966_02005) 427748..427966 - 219 Protein_384 hypothetical protein -
O5966_RS02010 (O5966_02010) 428288..429211 + 924 WP_011407409.1 arginase -
O5966_RS02015 (O5966_02015) 429319..429471 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
O5966_RS02020 (O5966_02020) 429535..429669 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
O5966_RS02025 (O5966_02025) 429913..430122 + 210 WP_011407411.1 CsbD family protein -
O5966_RS02030 (O5966_02030) 430291..431580 + 1290 WP_011257370.1 tryptophan--tRNA ligase -
O5966_RS02035 (O5966_02035) 431711..432655 + 945 WP_027704118.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T266785 WP_011257368.1 NZ_CP114600:429535-429669 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT266785 WP_011407410.1 NZ_CP114600:429319-429471 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References