Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 396315..396810 Replicon chromosome
Accession NZ_CP114590
Organism Salinivibrio kushneri strain TGB19

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag O4546_RS01975 Protein ID WP_269587342.1
Coordinates 396315..396581 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag O4546_RS01980 Protein ID WP_069587979.1
Coordinates 396568..396810 (+) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O4546_RS01950 (O4546_01950) 391325..391999 - 675 WP_269587338.1 inovirus-type Gp2 protein -
O4546_RS01955 (O4546_01955) 392602..393729 + 1128 WP_269587339.1 ISAs1 family transposase -
O4546_RS01960 (O4546_01960) 393967..394380 - 414 WP_269587340.1 hypothetical protein -
O4546_RS01965 (O4546_01965) 394377..394562 - 186 WP_077639600.1 AlpA family phage regulatory protein -
O4546_RS01970 (O4546_01970) 394792..396132 + 1341 WP_269587341.1 multidrug transporter -
O4546_RS01975 (O4546_01975) 396315..396581 + 267 WP_269587342.1 BrnT family toxin Toxin
O4546_RS01980 (O4546_01980) 396568..396810 + 243 WP_069587979.1 CopG family transcriptional regulator Antitoxin
O4546_RS01985 (O4546_01985) 396961..398109 - 1149 WP_269587343.1 DUF3103 family protein -
O4546_RS01990 (O4546_01990) 398487..399707 - 1221 WP_269587344.1 arginine deiminase -
O4546_RS01995 (O4546_01995) 400035..400415 + 381 WP_077456441.1 ribonuclease E inhibitor RraB -
O4546_RS02000 (O4546_02000) 400468..400851 - 384 WP_077606068.1 DUF2061 domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 392602..393729 1127


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10012.31 Da        Isoelectric Point: 8.4124

>T266754 WP_269587342.1 NZ_CP114590:396315-396581 [Salinivibrio kushneri]
MGGFEFDENKSRLNATKHGIDFQAAQGLWDDPYLIEIPAKTSDEPRYVVIGMLNGKYWSGVITYRGNNIRIISVRRSRKA
EVSLYESA

Download         Length: 267 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9358.56 Da        Isoelectric Point: 6.4838

>AT266754 WP_069587979.1 NZ_CP114590:396568-396810 [Salinivibrio kushneri]
MKAHEFDAKFESDDDIVDDLALSKAKRPRQTQKRVNVDFPEWMLASLDREASRVGVTRQSIIKMWLAERLENVSHHHTPE

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References