Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | Txe-Axe/YoeB-RelB |
Location | 27861..28371 | Replicon | plasmid unnamed5 |
Accession | NZ_CP114548 | ||
Organism | Ligilactobacillus salivarius strain S92 |
Toxin (Protein)
Gene name | Txe | Uniprot ID | - |
Locus tag | O2U06_RS11390 | Protein ID | WP_044006010.1 |
Coordinates | 27861..28112 (-) | Length | 84 a.a. |
Antitoxin (Protein)
Gene name | Axe | Uniprot ID | - |
Locus tag | O2U06_RS11395 | Protein ID | WP_044006009.1 |
Coordinates | 28105..28371 (-) | Length | 89 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
O2U06_RS11360 | 23189..23323 | - | 135 | WP_283475131.1 | hypothetical protein | - |
O2U06_RS11365 | 23527..24039 | - | 513 | WP_283548122.1 | hypothetical protein | - |
O2U06_RS11370 | 24481..24879 | - | 399 | WP_087250758.1 | hypothetical protein | - |
O2U06_RS11375 | 24888..25985 | - | 1098 | WP_044006012.1 | ParM/StbA family protein | - |
O2U06_RS11380 | 26300..26617 | + | 318 | WP_283548105.1 | hypothetical protein | - |
O2U06_RS11385 | 26797..27405 | + | 609 | WP_283548106.1 | hypothetical protein | - |
O2U06_RS11390 | 27861..28112 | - | 252 | WP_044006010.1 | Txe/YoeB family addiction module toxin | Toxin |
O2U06_RS11395 | 28105..28371 | - | 267 | WP_044006009.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
O2U06_RS11400 | 28466..28801 | - | 336 | WP_283475111.1 | hypothetical protein | - |
O2U06_RS11405 | 29721..30056 | - | 336 | WP_283475113.1 | hypothetical protein | - |
O2U06_RS11410 | 30203..30589 | - | 387 | WP_283475114.1 | hypothetical protein | - |
O2U06_RS11415 | 30693..31106 | - | 414 | WP_283475116.1 | hypothetical protein | - |
O2U06_RS11420 | 31227..32459 | - | 1233 | WP_283475118.1 | RepB family plasmid replication initiator protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | - | - | 1..47535 | 47535 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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