Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 3713191..3713558 Replicon chromosome
Accession NZ_CP114134
Organism Xanthomonas fragariae strain YLX21

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag OZ429_RS17630 Protein ID WP_208588796.1
Coordinates 3713191..3713325 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID -
Locus tag OZ429_RS17635 Protein ID WP_269123527.1
Coordinates 3713406..3713558 (-) Length 51 a.a.

Genomic Context

OZ429_RS17600OZ429_RS17645OZ429_RS17650OZ429_RS17655OZ429_RS17605OZ429_RS17610OZ429_RS17620OZ429_RS17625OZ429_RS17630OZ429_RS17635OZ429_RS17640
Location: 3708223..3709325 (1103 bp)
Type: Others
Protein ID: Protein_3307
Location: 3714912..3715324 (413 bp)
Type: Others
Protein ID: Protein_3315
Location: 3715316..3715595 (280 bp)
Type: Others
Protein ID: Protein_3316
Location: 3716086..3717230 (1145 bp)
Type: Others
Protein ID: WP_269123529.1
Location: 3709378..3710286 (909 bp)
Type: Others
Protein ID: WP_269123525.1
Location: 3710304..3710897 (594 bp)
Type: Others
Protein ID: Protein_3309
Location: 3711184..3711390 (207 bp)
Type: Others
Protein ID: Protein_3310
Location: 3711573..3712862 (1290 bp)
Type: Others
Protein ID: WP_269123526.1
Location: 3713191..3713325 (135 bp)
Type: Toxin
Protein ID: WP_208588796.1
Location: 3713406..3713558 (153 bp)
Type: Antitoxin
Protein ID: WP_269123527.1
Location: 3713667..3714590 (924 bp)
Type: Others
Protein ID: WP_269123528.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
OZ429_RS17600 (OZ429_17600)3708223..3709325+1103Protein_3307alpha/beta fold hydrolase-
OZ429_RS17605 (OZ429_17605)3709378..3710286-909WP_269123525.1EamA family transporter RarD-
OZ429_RS17610 (OZ429_17610)3710304..3710897-594Protein_3309EamA family transporter-
OZ429_RS17620 (OZ429_17620)3711184..3711390-207Protein_3310peptidase M20-
OZ429_RS17625 (OZ429_17625)3711573..3712862-1290WP_269123526.1tryptophan--tRNA ligase-
OZ429_RS17630 (OZ429_17630)3713191..3713325-135WP_208588796.1entericidin A/B family lipoproteinToxin
OZ429_RS17635 (OZ429_17635)3713406..3713558-153WP_269123527.1entericidin A/B family lipoproteinAntitoxin
OZ429_RS17640 (OZ429_17640)3713667..3714590-924WP_269123528.1arginase-
OZ429_RS17645 (OZ429_17645)3714912..3715324+413Protein_3315roadblock/LC7 domain-containing protein-
OZ429_RS17650 (OZ429_17650)3715316..3715595+280Protein_3316GTPase-
OZ429_RS17655 (OZ429_17655)3716086..3717230+1145WP_269123529.1IS3 family transposase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4443.31 Da        Isoelectric Point: 10.2040

>T266324 WP_208588796.1 NZ_CP114134:c3713325-3713191 [Xanthomonas fragariae]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5193.15 Da        Isoelectric Point: 9.4952

>AT266324 WP_269123527.1 NZ_CP114134:c3713558-3713406 [Xanthomonas fragariae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDMQRAGSKVEKKADNCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References