Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 3043619..3044397 Replicon chromosome
Accession NZ_CP114134
Organism Xanthomonas fragariae strain YLX21

Toxin (Protein)


Gene name TacT2 Uniprot ID -
Locus tag OZ429_RS14305 Protein ID WP_269122574.1
Coordinates 3043906..3044397 (+) Length 164 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID G0CD67
Locus tag OZ429_RS14300 Protein ID WP_014508712.1
Coordinates 3043619..3043909 (+) Length 97 a.a.

Genomic Context

OZ429_RS14290OZ429_RS14295OZ429_RS14300OZ429_RS14305OZ429_RS14310OZ429_RS14315OZ429_RS14320OZ429_RS14325
Location: 3039919..3042498 (2580 bp)
Type: Others
Protein ID: WP_269122571.1
Location: 3043139..3043543 (405 bp)
Type: Others
Protein ID: WP_269122573.1
Location: 3043619..3043909 (291 bp)
Type: Antitoxin
Protein ID: WP_014508712.1
Location: 3043906..3044397 (492 bp)
Type: Toxin
Protein ID: WP_269122574.1
Location: 3044546..3045880 (1335 bp)
Type: Others
Protein ID: WP_269122576.1
Location: 3046339..3047016 (678 bp)
Type: Others
Protein ID: WP_002804927.1
Location: 3047042..3047485 (444 bp)
Type: Others
Protein ID: Protein_2684
Location: 3047708..3048613 (906 bp)
Type: Others
Protein ID: WP_208589518.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
OZ429_RS14290 (OZ429_14290)3039919..3042498+2580WP_269122571.1RHS repeat domain-containing protein-
OZ429_RS14295 (OZ429_14295)3043139..3043543+405WP_269122573.1SymE family type I addiction module toxin-
OZ429_RS14300 (OZ429_14300)3043619..3043909+291WP_014508712.1DUF1778 domain-containing proteinAntitoxin
OZ429_RS14305 (OZ429_14305)3043906..3044397+492WP_269122574.1GNAT family N-acetyltransferaseToxin
OZ429_RS14310 (OZ429_14310)3044546..3045880-1335WP_269122576.1HAMP domain-containing sensor histidine kinase-
OZ429_RS14315 (OZ429_14315)3046339..3047016-678WP_002804927.1response regulator transcription factor-
OZ429_RS14320 (OZ429_14320)3047042..3047485-444Protein_2684hypothetical protein-
OZ429_RS14325 (OZ429_14325)3047708..3048613-906WP_208589518.130S ribosomal protein S6--L-glutamate ligase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(43-144)

Antitoxin

Vibrio phage ICP1, Orf50

(14-88)


Sequences

Toxin        


Download         Length: 164 a.a.        Molecular weight: 17549.20 Da        Isoelectric Point: 8.9888

>T266323 WP_269122574.1 NZ_CP114134:3043906-3044397 [Xanthomonas fragariae]
MTVSAPEPLTAHHRVEPFASGVESLDHWLKRRALKNQATGASRAFVACADDRVVAYYALASSAVAVDATPGRFRRNMPDQ
IPVVVLGRLAVDQSLHGRGFGRALVQDAGKRILHAADTIGIRGLLVHALSADAKAFYERIGFEPSPLDPMVLVVTLEDLK
ASL

Download         Length: 492 bp

Antitoxin


Download         Length: 97 a.a.        Molecular weight: 10648.20 Da        Isoelectric Point: 10.5480

>AT266323 WP_014508712.1 NZ_CP114134:3043619-3043909 [Xanthomonas fragariae]
MSTPNTTPGKRETLNLRIKPEERSLIDRAAKARGKNRTDFMLDAARSAAEEALLDQTLIAASPDAYAAFLARLDMPPQPN
ARLRKTMQTPAPWEKA

Download         Length: 291 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A3E1LB51

References