Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-RelB
Location 128911..129488 Replicon chromosome
Accession NZ_CP113915
Organism Bifidobacterium sp. ESL0790

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OZY47_RS00430 Protein ID WP_277177995.1
Coordinates 129186..129488 (+) Length 101 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag OZY47_RS00425 Protein ID WP_277177994.1
Coordinates 128911..129177 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OZY47_RS00420 (OZY47_00420) 127279..128271 - 993 WP_277177993.1 alpha/beta hydrolase -
OZY47_RS00425 (OZY47_00425) 128911..129177 + 267 WP_277177994.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
OZY47_RS00430 (OZY47_00430) 129186..129488 + 303 WP_277177995.1 type II toxin-antitoxin system YafQ family toxin Toxin

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 111356..137795 26439


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(8-99)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-67)


Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 11612.26 Da        Isoelectric Point: 8.1441

>T266155 WP_277177995.1 NZ_CP113915:129186-129488 [Bifidobacterium sp. ESL0790]
MPMLTAHYTTAFARDVKRMKRKHEDTHIRDLKTVINLVLENTEEAKAELKRRHRAHYLTGDWSGVLECHIGNSADRLLLW
ETADGSVVFVRVGSHDELFR

Download         Length: 303 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9773.13 Da        Isoelectric Point: 8.6366

>AT266155 WP_277177994.1 NZ_CP113915:128911-129177 [Bifidobacterium sp. ESL0790]
MATVTVRVDEQTKKMASALAEEFGFDLSSVTRAFYKQMIREQAIPLNLSREPQPNKKTAAAIREANQMLRSGDRGFTSSD
AMFDSLGI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References