Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 3272344..3272885 Replicon chromosome
Accession NZ_CP113837
Organism Kitasatospora sp. YST-16

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OU787_RS14930 Protein ID WP_268659618.1
Coordinates 3272619..3272885 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID E4NE45
Locus tag OU787_RS14925 Protein ID WP_014136782.1
Coordinates 3272344..3272622 (+) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OU787_RS14900 (OU787_14900) 3268170..3268523 - 354 WP_268659613.1 hypothetical protein -
OU787_RS14905 (OU787_14905) 3268892..3269665 - 774 WP_268659614.1 TIGR04255 family protein -
OU787_RS14910 (OU787_14910) 3270055..3270654 + 600 WP_268659615.1 DUF4241 domain-containing protein -
OU787_RS14915 (OU787_14915) 3271164..3271625 + 462 WP_268659616.1 prevent-host-death family protein -
OU787_RS14920 (OU787_14920) 3271622..3271978 + 357 WP_268659617.1 hypothetical protein -
OU787_RS14925 (OU787_14925) 3272344..3272622 + 279 WP_014136782.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
OU787_RS14930 (OU787_14930) 3272619..3272885 + 267 WP_268659618.1 Txe/YoeB family addiction module toxin Toxin
OU787_RS14935 (OU787_14935) 3273188..3275629 + 2442 WP_268659619.1 helicase C-terminal domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-73)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10487.88 Da        Isoelectric Point: 7.3217

>T266133 WP_268659618.1 NZ_CP113837:3272619-3272885 [Kitasatospora sp. YST-16]
VKVRFTEHGWADYLSWQADDRRLLKRVNLLIDDIRRNGNEGIGKPEPLRHELADAWSRRIDQEHRLIYVLDEQADTLCVI
ACRYHYGK

Download         Length: 267 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 10153.30 Da        Isoelectric Point: 4.3633

>AT266133 WP_014136782.1 NZ_CP113837:3272344-3272622 [Kitasatospora sp. YST-16]
MKTMSATELRGNLAAALDAVESDAEELVITRAGHEPLVVVSLAEYASLRETDYLLRSPANAEHLRRSLQEYREGRAATRE
LIDPEDLAEQSA

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References