Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type VII Classification (family/domain) HepT-MntA/HepT(toxin)
Location 1498466..1499265 Replicon chromosome
Accession NZ_CP113504
Organism Pectobacterium brasiliense strain 21PCA_AGRO2

Toxin (Protein)


Gene name hepT Uniprot ID -
Locus tag OWC53_RS06905 Protein ID WP_039468157.1
Coordinates 1498466..1498885 (-) Length 140 a.a.

Antitoxin (Protein)


Gene name mntA Uniprot ID -
Locus tag OWC53_RS06910 Protein ID WP_039499124.1
Coordinates 1498882..1499265 (-) Length 128 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OWC53_RS06885 (OWC53_06880) 1493580..1494221 + 642 WP_010281304.1 uridine kinase -
OWC53_RS06890 (OWC53_06885) 1494329..1494910 + 582 WP_005974037.1 dCTP deaminase -
OWC53_RS06895 (OWC53_06890) 1494974..1496809 + 1836 WP_039544044.1 outer membrane assembly protein AsmA -
OWC53_RS06900 (OWC53_06895) 1497062..1498414 + 1353 WP_014914716.1 anaerobic C4-dicarboxylate transporter DcuC -
OWC53_RS06905 (OWC53_06900) 1498466..1498885 - 420 WP_039468157.1 DUF86 domain-containing protein Toxin
OWC53_RS06910 (OWC53_06905) 1498882..1499265 - 384 WP_039499124.1 nucleotidyltransferase domain-containing protein Antitoxin
OWC53_RS06915 (OWC53_06910) 1499401..1500987 - 1587 WP_014914717.1 TerC family protein -
OWC53_RS06920 (OWC53_06915) 1501715..1502812 + 1098 WP_268198475.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase -
OWC53_RS06925 (OWC53_06920) 1502930..1504066 + 1137 WP_094432850.1 polysaccharide export protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease HepT-like

(13-130)

Antitoxin

Polymerase beta, nucleotidyltransferase

(5-93)


Sequences

Toxin        


Download         Length: 140 a.a.        Molecular weight: 16086.43 Da        Isoelectric Point: 6.8630

>T265852 WP_039468157.1 NZ_CP113504:c1498885-1498466 [Pectobacterium brasiliense]
MTDILLNKSSTIQRCLRRIREEFDTEEGFRQNFTKQDSVILNIQRACEAAIDIANYLIRIKQLGIPQSSRDSFALLAANQ
IITLELSDNLQKMVGLRNIAVHDYQALNLDIVIHVISHRLSDFERFIKEIARYSDSQHL

Download         Length: 420 bp

Antitoxin


Download         Length: 128 a.a.        Molecular weight: 14340.49 Da        Isoelectric Point: 4.7434

>AT265852 WP_039499124.1 NZ_CP113504:c1499265-1498882 [Pectobacterium brasiliense]
MFDEIVLTLKKQMPDIKIIYLFGSQATGNARADSDVDIAIMATRALDPVERWELSHQLAKTVGHDVDLIDLLQASTVLKM
EVVRNGKLLYDAEATAGEFEMTTLSMYQHLQKERADIIRSFNQDLKA

Download         Length: 384 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References