Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | spoIISABC/SpoIISA-SpoIISB |
Location | 1241204..1242121 | Replicon | chromosome |
Accession | NZ_CP113418 | ||
Organism | Bacillus amyloliquefaciens strain WH1 |
Toxin (Protein)
Gene name | spoIISA | Uniprot ID | I2HQ15 |
Locus tag | OU987_RS06500 | Protein ID | WP_007407256.1 |
Coordinates | 1241375..1242121 (-) | Length | 249 a.a. |
Antitoxin (Protein)
Gene name | spoIISB | Uniprot ID | I2HQ14 |
Locus tag | OU987_RS06495 | Protein ID | WP_003154807.1 |
Coordinates | 1241204..1241374 (-) | Length | 57 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OU987_RS06455 (OU987_06455) | 1236437..1238059 | + | 1623 | WP_032874601.1 | pyocin knob domain-containing protein | - |
OU987_RS06460 (OU987_06460) | 1238072..1238443 | + | 372 | WP_032874603.1 | XkdW family protein | - |
OU987_RS06465 (OU987_06465) | 1238448..1238645 | + | 198 | WP_032874605.1 | XkdX family protein | - |
OU987_RS06470 (OU987_06470) | 1238702..1239463 | + | 762 | WP_032874607.1 | hypothetical protein | - |
OU987_RS06475 (OU987_06475) | 1239515..1239778 | + | 264 | WP_003154815.1 | hemolysin XhlA family protein | - |
OU987_RS06480 (OU987_06480) | 1239792..1240055 | + | 264 | WP_003154813.1 | phage holin | - |
OU987_RS06485 (OU987_06485) | 1240069..1240947 | + | 879 | WP_032874609.1 | N-acetylmuramoyl-L-alanine amidase | - |
OU987_RS06490 (OU987_06490) | 1240982..1241107 | - | 126 | WP_003154809.1 | hypothetical protein | - |
OU987_RS06495 (OU987_06495) | 1241204..1241374 | - | 171 | WP_003154807.1 | type II toxin-antitoxin system SpoIISB family antitoxin | Antitoxin |
OU987_RS06500 (OU987_06500) | 1241375..1242121 | - | 747 | WP_007407256.1 | type II toxin-antitoxin system SpoIISA family toxin | Toxin |
OU987_RS06505 (OU987_06505) | 1242226..1243224 | - | 999 | WP_032874611.1 | inorganic phosphate transporter | - |
OU987_RS06510 (OU987_06510) | 1243237..1243854 | - | 618 | WP_032874614.1 | DUF47 domain-containing protein | - |
OU987_RS06515 (OU987_06515) | 1244140..1245456 | - | 1317 | WP_032874616.1 | amino acid permease | - |
OU987_RS06520 (OU987_06520) | 1245778..1246728 | + | 951 | WP_032874618.1 | ring-cleaving dioxygenase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1197450..1299973 | 102523 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 249 a.a. Molecular weight: 29077.57 Da Isoelectric Point: 4.7755
>T265703 WP_007407256.1 NZ_CP113418:c1242121-1241375 [Bacillus amyloliquefaciens]
MLLFFQIMVWTMAAALILYVYASWRYEAKVKEKMFAIRKTWYLLFVLGSMVYWTYDPESLFAAWRQYLIVAVCFALIDAF
IFLSAYIKKLAGNELETDTREILEENNEMLHSYLEKLKTYQYLLKNEPIHVYYGSTEAYAEGISRLLAAYAEKMNVTASL
CDYSAQSDKDRLTEHMPDAADVQSRLNRKDVYYDQKGRLVLIPFTVQNRHYVIKLTSENLLTEFDYLLFTSLTSIYDLML
PIEEEGDG
MLLFFQIMVWTMAAALILYVYASWRYEAKVKEKMFAIRKTWYLLFVLGSMVYWTYDPESLFAAWRQYLIVAVCFALIDAF
IFLSAYIKKLAGNELETDTREILEENNEMLHSYLEKLKTYQYLLKNEPIHVYYGSTEAYAEGISRLLAAYAEKMNVTASL
CDYSAQSDKDRLTEHMPDAADVQSRLNRKDVYYDQKGRLVLIPFTVQNRHYVIKLTSENLLTEFDYLLFTSLTSIYDLML
PIEEEGDG
Download Length: 747 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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