Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tsbAT/-
Location 1261579..1262355 Replicon chromosome
Accession NZ_CP113037
Organism Staphylococcus aureus strain Zilean

Toxin (Protein)


Gene name tsbT Uniprot ID X5E2E6
Locus tag OS091_RS06555 Protein ID WP_000031108.1
Coordinates 1262203..1262355 (+) Length 51 a.a.

Antitoxin (Protein)


Gene name tsbA Uniprot ID A0A6B1RP77
Locus tag OS091_RS06550 Protein ID WP_001251218.1
Coordinates 1261579..1262178 (+) Length 200 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OS091_RS06530 1257495..1258952 + 1458 WP_000649908.1 ABC transporter permease subunit -
OS091_RS06535 1258945..1259667 + 723 WP_000590809.1 amino acid ABC transporter ATP-binding protein -
OS091_RS06540 1259818..1260945 + 1128 WP_000379977.1 tRNA epoxyqueuosine(34) reductase QueG -
OS091_RS06545 1260950..1261420 + 471 WP_000181394.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
OS091_RS06550 1261579..1262178 + 600 WP_001251218.1 glucosamine-6-phosphate isomerase Antitoxin
OS091_RS06555 1262203..1262355 + 153 WP_000031108.1 SAS053 family protein Toxin
OS091_RS06560 1263018..1263413 + 396 WP_000901022.1 hypothetical protein -
OS091_RS06565 1263609..1264994 + 1386 WP_000116233.1 class II fumarate hydratase -
OS091_RS06570 1265459..1266280 - 822 WP_000669384.1 RluA family pseudouridine synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Glucosamine-6-phosphate isomerase

(124-196)


Sequences

Toxin        


Download         Length: 51 a.a.        Molecular weight: 5936.28 Da        Isoelectric Point: 3.8962

>T265249 WP_000031108.1 NZ_CP113037:1262203-1262355 [Staphylococcus aureus]
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ

Download         Length: 153 bp

Antitoxin


Download         Length: 200 a.a.        Molecular weight: 22357.50 Da        Isoelectric Point: 5.1445

>AT265249 WP_001251218.1 NZ_CP113037:1261579-1262178 [Staphylococcus aureus]
MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAPVLDELKKNIEKHAVDFSQINILDYDDKKSYFEALGV
PAGQVYPIAYEKDAIELIADKIKTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFIVVTGANKRDVVEKLYQENGK
TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA

Download         Length: 600 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB X5E2E6

Antitoxin

Source ID Structure
AlphaFold DB A0A6B1RP77

References