Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 2360466..2361379 Replicon chromosome
Accession NZ_CP112887
Organism Raoultella electrica strain S2-IND-01-C

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag OR613_RS11415 Protein ID WP_131047981.1
Coordinates 2360466..2360939 (-) Length 158 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag OR613_RS11420 Protein ID WP_131047982.1
Coordinates 2360936..2361379 (-) Length 148 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OR613_RS11395 (OR613_11400) 2356629..2357939 + 1311 WP_131047977.1 type I-F CRISPR-associated protein Csy1 -
OR613_RS11400 (OR613_11405) 2357936..2358871 + 936 WP_131047978.1 type I-F CRISPR-associated protein Csy2 -
OR613_RS11405 (OR613_11410) 2358882..2359880 + 999 WP_131047979.1 type I-F CRISPR-associated protein Csy3 -
OR613_RS11410 (OR613_11415) 2359890..2360444 + 555 WP_131047980.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 -
OR613_RS11415 (OR613_11420) 2360466..2360939 - 474 WP_131047981.1 RES domain-containing protein Toxin
OR613_RS11420 (OR613_11425) 2360936..2361379 - 444 WP_131047982.1 DUF2384 domain-containing protein Antitoxin
OR613_RS11440 (OR613_11445) 2363069..2363545 - 477 WP_141964474.1 acid resistance repetitive basic protein Asr -
OR613_RS11445 (OR613_11450) 2363737..2364366 - 630 WP_131047984.1 NAD(P)-binding domain-containing protein -
OR613_RS11450 (OR613_11455) 2364474..2365367 + 894 WP_100683647.1 LysR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(3-148)

Antitoxin

Antitoxin Xre/MbcA/ParS-like, toxin-binding domain

(95-144)


Sequences

Toxin        


Download         Length: 158 a.a.        Molecular weight: 17558.87 Da        Isoelectric Point: 5.0692

>T264948 WP_131047981.1 NZ_CP112887:c2360939-2360466 [Raoultella electrica]
MIFYRLVMGRYASEAWSGSGANQYGGRWNHKGHPAVYVSASISLASLEILVHVKKDAVLNQYQLFSIDIPDDQIEYLDQH
WLPEDWQENPAPVSTMDLGTGWLQATSALALVLPSCIIPYENNAILNPLHPAFHQALASVQQYPFVFDTRLAEKTAS

Download         Length: 474 bp

Antitoxin


Download         Length: 148 a.a.        Molecular weight: 16465.69 Da        Isoelectric Point: 5.7867

>AT264948 WP_131047982.1 NZ_CP112887:c2361379-2360936 [Raoultella electrica]
MRTWVPEQKPADNALWRYAGLPANRGIRLIEFLNQGLPVSVLDNIHEWTEMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDTAVDYFGSKDEAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA

Download         Length: 444 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References